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protocols::mpi_refinement::WorkUnit_PartialAbinitio Member List

This is the complete list of members for protocols::mpi_refinement::WorkUnit_PartialAbinitio, including all inherited members.

add_blacklist(int mpi_rank)protocols::wum::WorkUnitBase
blacklist_protocols::wum::WorkUnitBaseprotected
clear_blacklist()protocols::wum::WorkUnitBase
clear_serial_data()protocols::wum::WorkUnitBaseinlinevirtual
clone() const overrideprotocols::mpi_refinement::WorkUnit_PartialAbinitioinlinevirtual
create_unique_id()protocols::wum::WorkUnitBaseinlineprotected
decoys() constprotocols::wum::WorkUnit_SilentStructStoreinline
decoys()protocols::wum::WorkUnit_SilentStructStoreinline
decoys_protocols::wum::WorkUnit_SilentStructStoreprivate
deserialize() overrideprotocols::wum::WorkUnit_SilentStructStorevirtual
extra_data_1()protocols::wum::WorkUnitBaseinline
extra_data_2()protocols::wum::WorkUnitBaseinline
extra_data_3()protocols::wum::WorkUnitBaseinline
get_energy(std::string const &sfxn_name, bool const softpack=false, core::Real const weight_coord_cst=0.0) constprotocols::mpi_refinement::WorkUnit_Samplerprotected
get_movemap(core::pose::Pose const &pose, std::string const &mode, bool const nonideal) constprotocols::mpi_refinement::WorkUnit_Samplerprotected
get_nsteps() constprotocols::mpi_refinement::WorkUnit_PartialAbinitioinlineprotected
get_options() constprotocols::wum::WorkUnitBase
get_reconstruct() constprotocols::mpi_refinement::WorkUnit_PartialAbinitioinlineprotected
get_res1() constprotocols::mpi_refinement::WorkUnit_PartialAbinitioinlineprotected
get_res2() constprotocols::mpi_refinement::WorkUnit_PartialAbinitioinlineprotected
get_run_time()protocols::wum::WorkUnitBase
get_wu_type() constprotocols::wum::WorkUnitBase
headerprotocols::wum::WorkUnitBaseprotected
id()protocols::wum::WorkUnitBaseinline
in_blacklist(int mpi_rank)protocols::wum::WorkUnitBase
init_from_cmd(const core::Size mpi_rank)protocols::mpi_refinement::WorkUnit_Samplervirtual
last_received_from()protocols::wum::WorkUnitBaseinline
last_received_from_protocols::wum::WorkUnitBaseprotected
mem_footprint() constprotocols::wum::WorkUnitBaseinlinevirtual
print(std::ostream &out, bool verbose=false) constprotocols::wum::WorkUnitBase
ramp_minpack_loop2(core::pose::Pose &pose, utility::vector1< core::Size > const &loopres, core::scoring::ScoreFunctionCOP sfxn, bool const nonideal=true, bool const ramp=true, bool const efficient=false, core::Real dist_cut=0.0)protocols::mpi_refinement::WorkUnit_Samplerprotected
raw_data_dump(unsigned char **raw_data_ptr) constprotocols::wum::WorkUnitBaseprivate
raw_data_load(const unsigned char *raw_data_ptr, unsigned int size)protocols::wum::WorkUnitBaseprivate
raw_data_size() constprotocols::wum::WorkUnitBaseprivate
repack(core::pose::Pose &pose, core::scoring::ScoreFunctionOP sfxn)protocols::mpi_refinement::WorkUnit_Samplerprotected
revert_facts_params() constprotocols::mpi_refinement::WorkUnit_Samplerprotected
run() overrideprotocols::mpi_refinement::WorkUnit_PartialAbinitiovirtual
serial_data()protocols::wum::WorkUnitBaseinlineprotected
serial_data() constprotocols::wum::WorkUnitBaseinlineprotected
serial_data_protocols::wum::WorkUnitBaseprivate
serialize() overrideprotocols::wum::WorkUnit_SilentStructStorevirtual
set_defaults()protocols::mpi_refinement::WorkUnit_PartialAbinitioprotected
set_extra_data_1(core::Size const value)protocols::wum::WorkUnitBaseinline
set_extra_data_2(core::Size const value)protocols::wum::WorkUnitBaseinline
set_extra_data_3(core::Size const value)protocols::wum::WorkUnitBaseinline
set_nsteps(core::Size const setting)protocols::mpi_refinement::WorkUnit_PartialAbinitioinline
set_options(const std::string &text)protocols::wum::WorkUnitBase
set_reconstruct(core::Size const setting)protocols::mpi_refinement::WorkUnit_PartialAbinitioinline
set_res1(core::Size const setting)protocols::mpi_refinement::WorkUnit_PartialAbinitioinline
set_res2(core::Size const setting)protocols::mpi_refinement::WorkUnit_PartialAbinitioinline
set_run_start()protocols::wum::WorkUnitBaseprotected
set_run_stop()protocols::wum::WorkUnitBaseprotected
set_wu_type(const std::string &text)protocols::wum::WorkUnitBase
setup_score(std::string sfxn_name) constprotocols::mpi_refinement::WorkUnit_PartialAbinitioprivate
store_to_decoys(core::io::silent::SilentStructCOP start_struct, core::pose::Pose const &pose, std::string const &additional_tag="")protocols::mpi_refinement::WorkUnit_Samplerprotected
store_to_decoys(core::io::silent::SilentStructCOP start_struct, core::io::silent::SilentStructOP ss, std::string const &additional_tag="")protocols::mpi_refinement::WorkUnit_Samplerprotected
superimpose_to_ref(core::pose::Pose const &pose_ref, core::pose::Pose &pose_work, utility::vector1< core::Size > exclude_res=utility::vector1< core::Size >(0)) constprotocols::mpi_refinement::WorkUnit_Samplerprotected
WorkUnit_PartialAbinitio(core::Size const nsteps=0, bool const reconstruct=false)protocols::mpi_refinement::WorkUnit_PartialAbinitio
WorkUnit_Sampler()protocols::mpi_refinement::WorkUnit_Samplerinline
WorkUnit_SilentStructStore()protocols::wum::WorkUnit_SilentStructStoreinline
WorkUnitBase()protocols::wum::WorkUnitBase
~WorkUnit_SilentStructStore() override=defaultprotocols::wum::WorkUnit_SilentStructStore
~WorkUnitBase() override=defaultprotocols::wum::WorkUnitBase