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core::pack::interaction_graph::OnTheFlyNode Member List

This is the complete list of members for core::pack::interaction_graph::OnTheFlyNode, including all inherited members.

add_edge(EdgeBase *edge_ptr)core::pack::interaction_graph::NodeBase
add_to_one_body_energies(ObjexxFCL::FArray1< core::PackerEnergy > &energy1b) overridecore::pack::interaction_graph::OnTheFlyNodevirtual
add_to_one_body_energy(int state, core::PackerEnergy energy) overridecore::pack::interaction_graph::OnTheFlyNodevirtual
assign_zero_state()=0core::pack::interaction_graph::NodeBasepure virtual
bb_bounding_sphere() const core::pack::interaction_graph::OnTheFlyNodeinlineprotected
bb_bounding_sphere_core::pack::interaction_graph::OnTheFlyNodeprivate
BoundingSphere typedefcore::pack::interaction_graph::OnTheFlyNode
compute_rotamer_pair_energy(int edge_making_energy_request, int state_this, int state_other) const core::pack::interaction_graph::OnTheFlyNode
count_dynamic_memory() const overridecore::pack::interaction_graph::OnTheFlyNodevirtual
count_static_memory() const override=0core::pack::interaction_graph::OnTheFlyNodepure virtual
depth_first_connected_component_counting()core::pack::interaction_graph::NodeBase
distinguish_backbone_and_sidechain() const core::pack::interaction_graph::OnTheFlyNodeinline
distinguish_backbone_and_sidechain(bool setting)core::pack::interaction_graph::OnTheFlyNode
distinguish_backbone_and_sidechain_core::pack::interaction_graph::OnTheFlyNodeprivate
drop_all_edges()core::pack::interaction_graph::NodeBase
drop_edge(std::list< EdgeBase * >::iterator edge_iterator)core::pack::interaction_graph::NodeBase
edge_list_begin()core::pack::interaction_graph::NodeBase
edge_list_end()core::pack::interaction_graph::NodeBase
find_edge(int other_node_index) const core::pack::interaction_graph::NodeBase
FixedBBNode(InteractionGraphBase *owner, int node_id, int num_states)core::pack::interaction_graph::FixedBBNodeinline
get_adjacent_node(int index) const core::pack::interaction_graph::NodeBaseinline
get_adjacent_node(int index)core::pack::interaction_graph::NodeBaseinline
get_adjacent_otf_node(int index)core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_adjacent_otf_node(int index) const core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_edge_vector_up_to_date() const core::pack::interaction_graph::NodeBaseinlineprotected
get_incident_edge(int index) const core::pack::interaction_graph::NodeBaseinline
get_incident_edge(int index)core::pack::interaction_graph::NodeBaseinline
get_incident_otf_edge(int edge)core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_incident_otf_edge(int edge) const core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_index_of_adjacent_node(int index) const core::pack::interaction_graph::NodeBaseinline
get_node_index() const core::pack::interaction_graph::NodeBaseinline
get_num_aa_types() const core::pack::interaction_graph::OnTheFlyNodeinline
get_num_edges_to_larger_indexed_nodes() const core::pack::interaction_graph::NodeBaseinline
get_num_edges_to_smaller_indexed_nodes() const core::pack::interaction_graph::NodeBaseinline
get_num_incident_edges() const core::pack::interaction_graph::NodeBaseinline
get_num_states() const core::pack::interaction_graph::NodeBase
get_num_states_for_aa_type(int aa_type)core::pack::interaction_graph::OnTheFlyNodeinline
get_num_states_for_aa_types()core::pack::interaction_graph::OnTheFlyNodeinline
get_num_states_for_aa_types() const core::pack::interaction_graph::OnTheFlyNodeinline
get_on_the_fly_owner()core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_on_the_fly_owner() const core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_one_body_energy(int state) const core::pack::interaction_graph::OnTheFlyNodeinline
get_owner() const core::pack::interaction_graph::NodeBaseinlineprotected
get_owner()core::pack::interaction_graph::NodeBaseinlineprotected
get_rotamer(int state) const core::pack::interaction_graph::OnTheFlyNodeinlineprotected
get_sparse_mat_info_for_state(int state) const core::pack::interaction_graph::OnTheFlyNodeinline
get_state_offset_for_aatype(int aatype) const core::pack::interaction_graph::OnTheFlyNodeinline
NodeBase(InteractionGraphBase *, int node_id, int num_states)core::pack::interaction_graph::NodeBase
num_aa_types_core::pack::interaction_graph::OnTheFlyNodeprivate
num_states_for_aatype_core::pack::interaction_graph::OnTheFlyNodeprivate
one_body_energies_core::pack::interaction_graph::OnTheFlyNodeprivate
OnTheFlyNode(InteractionGraphBase *owner, int node_id, int num_states)core::pack::interaction_graph::OnTheFlyNode
prepare_for_simulated_annealing()=0core::pack::interaction_graph::NodeBasepure virtual
print() const =0core::pack::interaction_graph::NodeBasepure virtual
rotamer_set_core::pack::interaction_graph::OnTheFlyNodeprivate
rotamers_core::pack::interaction_graph::OnTheFlyNodeprivate
sc_bounding_sphere(int state) const core::pack::interaction_graph::OnTheFlyNodeinlineprotected
sc_bounding_spheres_core::pack::interaction_graph::OnTheFlyNodeprivate
set_one_body_energy(int state, core::PackerEnergy energy)core::pack::interaction_graph::OnTheFlyNodevirtual
set_rotamers(rotamer_set::RotamerSetCOP rotamers)core::pack::interaction_graph::OnTheFlyNode
sparse_mat_info_for_state_core::pack::interaction_graph::OnTheFlyNodeprivate
state_offset_for_aatype_core::pack::interaction_graph::OnTheFlyNodeprivate
state_unassigned() const =0core::pack::interaction_graph::NodeBasepure virtual
update_edge_vector()core::pack::interaction_graph::NodeBaseprotected
update_one_body_energy(int state, core::PackerEnergy energy) overridecore::pack::interaction_graph::OnTheFlyNodevirtual
zero_one_body_energies() overridecore::pack::interaction_graph::OnTheFlyNodevirtual
zero_one_body_energy(int state)core::pack::interaction_graph::OnTheFlyNodevirtual
~FixedBBNode() overridecore::pack::interaction_graph::FixedBBNodeinline
~NodeBase()core::pack::interaction_graph::NodeBasevirtual
~OnTheFlyNode() overridecore::pack::interaction_graph::OnTheFlyNode