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CDRH3Modeler.hh File Reference
#include <core/fragment/FragSet.fwd.hh>
#include <core/fragment/FragData.fwd.hh>
#include <core/pack/task/TaskFactory.fwd.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <protocols/antibody_legacy/AntibodyClass.hh>
#include <protocols/loops/Loops.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <utility/vector1.fwd.hh>
#include <utility/vector1.hh>

Classes

class  protocols::antibody_legacy::CDRH3Modeler
 Ab initio modeling of CDR H3 loop. More...
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::antibody_legacy
 

Typedefs

typedef
utility::pointer::shared_ptr
< CDRH3Modeler > 
protocols::antibody_legacy::CDRH3ModelerOP
 
typedef
utility::pointer::shared_ptr
< const CDRH3Modeler > 
protocols::antibody_legacy::CDRH3ModelerCOP
 

Functions

void protocols::antibody_legacy::read_H3_cter_fragment (Antibody &antibody_in, utility::vector1< core::fragment::FragData > &H3_base_library, bool is_camelid)
 
void protocols::antibody_legacy::simple_one_loop_fold_tree (pose::Pose &pose_in, loops::Loop const &loop)
 
void protocols::antibody_legacy::simple_fold_tree (pose::Pose &pose_in, core::Size jumppoint1, core::Size cutpoint, core::Size jumppoint2)
 

Detailed Description

Author
Aroop Sircar (aroop.nosp@m.sirc.nosp@m.ar@ya.nosp@m.hoo..nosp@m.com)