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Rosetta
2020.50
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#include <PruneBuriedUnsatsOperation.hh>
Public Member Functions | |
PruneBuriedUnsatsOperation () | |
default constructor More... | |
PruneBuriedUnsatsOperation (PruneBuriedUnsatsOperation const &other) | |
copy constructor More... | |
~PruneBuriedUnsatsOperation () override | |
destructor More... | |
PruneBuriedUnsatsOperation & | operator= (PruneBuriedUnsatsOperation const &other) |
core::pack::task::operation::TaskOperationOP | clone () const override |
make clone More... | |
void | apply (core::pose::Pose const &pose, core::pack::task::PackerTask &task) const override |
apply More... | |
void | parse_tag (TagCOP tag, DataMap &) override |
Used to parse an xml-like tag to load parameters and properties. More... | |
bool | allow_even_trades () const |
core::Real | atomic_depth_probe_radius () const |
core::Real | atomic_depth_resolution () const |
core::Real | atomic_depth_cutoff () const |
core::Real | minimum_hbond_energy () const |
void | allow_even_trades (bool allow_even_trades) |
void | atomic_depth_probe_radius (core::Real atomic_depth_probe_radius) |
void | atomic_depth_resolution (core::Real atomic_depth_resolution) |
void | atomic_depth_cutoff (core::Real atomic_depth_cutoff) |
void | minimum_hbond_energy (core::Real minimum_hbond_energy) |
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~TaskOperation () override | |
virtual void | provide_citation_info (basic::citation_manager::CitationCollectionList &) const |
Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More... | |
Static Public Member Functions | |
static void | provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd) |
static std::string | keyname () |
Private Attributes | |
bool | allow_even_trades_ |
Allow residues that satisfy an unsat and create a new unsatisfiable one. More... | |
core::Real | atomic_depth_probe_radius_ |
core::Real | atomic_depth_resolution_ |
core::Real | atomic_depth_cutoff_ |
core::Real | minimum_hbond_energy_ |
core::scoring::ScoreFunctionOP | scorefxn_sc_ |
core::scoring::ScoreFunctionOP | scorefxn_bb_ |
Additional Inherited Members | |
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typedef utility::tag::TagCOP | TagCOP |
typedef basic::datacache::DataMap | DataMap |
typedef pose::Pose | Pose |
protocols::task_operations::PruneBuriedUnsatsOperation::PruneBuriedUnsatsOperation | ( | ) |
protocols::task_operations::PruneBuriedUnsatsOperation::PruneBuriedUnsatsOperation | ( | PruneBuriedUnsatsOperation const & | other | ) |
copy constructor
default constructor
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overridedefault |
destructor
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inline |
References allow_even_trades_.
Referenced by parse_tag().
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inline |
References allow_even_trades(), and allow_even_trades_.
Referenced by allow_even_trades().
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overridevirtual |
apply
Implements core::pack::task::operation::TaskOperation.
References allow_even_trades_, core::pack::task::PackerTask::append_rotamersets_operation(), atomic_depth_cutoff_, atomic_depth_probe_radius_, atomic_depth_resolution_, core::pose::symmetry::is_symmetric(), minimum_hbond_energy_, scorefxn_bb_, and scorefxn_sc_.
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inline |
References atomic_depth_cutoff_.
Referenced by parse_tag().
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inline |
References atomic_depth_cutoff(), and atomic_depth_cutoff_.
Referenced by atomic_depth_cutoff().
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inline |
References atomic_depth_probe_radius_.
Referenced by parse_tag().
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inline |
References atomic_depth_probe_radius(), and atomic_depth_probe_radius_.
Referenced by atomic_depth_probe_radius().
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inline |
References atomic_depth_resolution_.
Referenced by parse_tag().
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inline |
References atomic_depth_resolution(), and atomic_depth_resolution_.
Referenced by atomic_depth_resolution().
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overridevirtual |
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inlinestatic |
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inline |
References minimum_hbond_energy_.
Referenced by parse_tag().
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inline |
References minimum_hbond_energy(), and minimum_hbond_energy_.
Referenced by minimum_hbond_energy().
PruneBuriedUnsatsOperation & protocols::task_operations::PruneBuriedUnsatsOperation::operator= | ( | PruneBuriedUnsatsOperation const & | other | ) |
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overridevirtual |
Used to parse an xml-like tag to load parameters and properties.
Reimplemented from core::pack::task::operation::TaskOperation.
References allow_even_trades(), atomic_depth_cutoff(), atomic_depth_probe_radius(), atomic_depth_resolution(), and minimum_hbond_energy().
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static |
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private |
Allow residues that satisfy an unsat and create a new unsatisfiable one.
Referenced by allow_even_trades(), apply(), and operator=().
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private |
Referenced by apply(), atomic_depth_cutoff(), and operator=().
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private |
Referenced by apply(), atomic_depth_probe_radius(), and operator=().
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private |
Referenced by apply(), atomic_depth_resolution(), and operator=().
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private |
Referenced by apply(), minimum_hbond_energy(), and operator=().
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private |
Referenced by apply(), operator=(), and PruneBuriedUnsatsOperation().
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private |
Referenced by apply(), operator=(), and PruneBuriedUnsatsOperation().