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protocols::scoring::methods::pcs Namespace Reference

Classes

class  GridSearchIterator
 
class  PCS_data
 
class  PCS_data_input
 PCS_data_input contain all the input information for the PCS. This includes all the information from the .npc files. More...
 
class  PCS_data_input_manager
 
class  PCS_data_per_lanthanides
 
class  PCS_Energy
 
class  PCS_Energy_parameters_manager
 
class  PCS_file_data
 PCS_file_data contain all the information of a .npc file one per lanthanide. More...
 
class  PCS_line_data
 PCS_line_data class: hold a line of the input file information (.npc format) One PCS_line_data per line in the input file. More...
 
class  PCS_tensor
 
class  PseudocontactShiftEnergyCreator
 
class  TensorsOptimizer
 

Typedefs

typedef
utility::pointer::shared_ptr
< GridSearchIterator
GridSearchIteratorOP
 
typedef
utility::pointer::shared_ptr
< GridSearchIterator const > 
GridSearchIteratorCOP
 
typedef
utility::pointer::shared_ptr
< PCS_data
PCS_dataOP
 
typedef
utility::pointer::shared_ptr
< PCS_Energy
PCS_EnergyOP
 
typedef
utility::pointer::shared_ptr
< PCS_Energy const > 
PCS_EnergyCOP
 

Functions

static basic::Tracer TR_pcs_d_p_l ("protocols.scoring.methods.pcs.PCS_data_per_lanthanides")
 
static basic::Tracer TR_pcs_d ("protocols.scoring.methods.pcs.PCS_data")
 
void fill_A_line (utility::vector1< core::Real > &A_line, core::Real const xM, core::Real const yM, core::Real const zM, core::Real const x, core::Real const y, core::Real const z)
 
std::ostream & operator<< (std::ostream &out, const PCS_data &P_d)
 
std::ostream & operator<< (std::ostream &out, const PCS_data_per_lanthanides &PCS_d_p_l)
 
static basic::Tracer TR_PCS_Energy ("protocols.scoring.methods.pcs.PCS_Energy")
 
static basic::Tracer TR_PCS_d_i ("protocols.scoring.methods.pcs.PCS_data_input")
 
std::ostream & operator<< (std::ostream &out, const PCS_line_data &PCS_l_d)
 
std::ostream & operator<< (std::ostream &out, const PCS_file_data &PCS_f_d)
 
std::ostream & operator<< (std::ostream &out, const PCS_data_input &PCS_d_i)
 
std::ostream & operator<< (std::ostream &out, const PCS_tensor &PCS_t)
 
static basic::Tracer TR_tsr_opt ("protocols.scoring.methods.pcs.TensorsOptimizer")
 

Typedef Documentation

typedef utility::pointer::shared_ptr< GridSearchIterator const > protocols::scoring::methods::pcs::GridSearchIteratorCOP
typedef utility::pointer::shared_ptr< PCS_data > protocols::scoring::methods::pcs::PCS_dataOP
typedef utility::pointer::shared_ptr< PCS_Energy const > protocols::scoring::methods::pcs::PCS_EnergyCOP
typedef utility::pointer::shared_ptr< PCS_Energy > protocols::scoring::methods::pcs::PCS_EnergyOP

Function Documentation

void protocols::scoring::methods::pcs::fill_A_line ( utility::vector1< core::Real > &  A_line,
core::Real const  xM,
core::Real const  yM,
core::Real const  zM,
core::Real const  x,
core::Real const  y,
core::Real const  z 
)
std::ostream& protocols::scoring::methods::pcs::operator<< ( std::ostream &  out,
const PCS_tensor &  PCS_t 
)
std::ostream& protocols::scoring::methods::pcs::operator<< ( std::ostream &  out,
const PCS_line_data &  PCS_l_d 
)
std::ostream& protocols::scoring::methods::pcs::operator<< ( std::ostream &  out,
const PCS_file_data &  PCS_f_d 
)
std::ostream& protocols::scoring::methods::pcs::operator<< ( std::ostream &  out,
const PCS_data_input &  PCS_d_i 
)
std::ostream& protocols::scoring::methods::pcs::operator<< ( std::ostream &  out,
const PCS_data &  P_d 
)
std::ostream& protocols::scoring::methods::pcs::operator<< ( std::ostream &  out,
const PCS_data_per_lanthanides &  PCS_d_p_l 
)
static basic::Tracer protocols::scoring::methods::pcs::TR_pcs_d ( "protocols.scoring.methods.pcs.PCS_data"  )
static
static basic::Tracer protocols::scoring::methods::pcs::TR_PCS_d_i ( "protocols.scoring.methods.pcs.PCS_data_input"  )
static
static basic::Tracer protocols::scoring::methods::pcs::TR_pcs_d_p_l ( "protocols.scoring.methods.pcs.PCS_data_per_lanthanides"  )
static
static basic::Tracer protocols::scoring::methods::pcs::TR_PCS_Energy ( "protocols.scoring.methods.pcs.PCS_Energy"  )
static
static basic::Tracer protocols::scoring::methods::pcs::TR_tsr_opt ( "protocols.scoring.methods.pcs.TensorsOptimizer"  )
static