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Namespaces | Functions
MPResidueLipophilicityEnergy.cc File Reference

Fullatom Smoothed Membrane Environment Energy. More...

#include <core/energy_methods/MPResidueLipophilicityEnergy.hh>
#include <core/energy_methods/MPResidueLipophilicityEnergyCreator.hh>
#include <core/chemical/AA.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/conformation/membrane/SpanningTopology.hh>
#include <core/conformation/Atom.hh>
#include <core/id/AtomID.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/TwelveANeighborGraph.hh>
#include <core/scoring/ContextGraphTypes.hh>
#include <utility/graph/Graph.hh>
#include <core/scoring/membrane/MembraneData.hh>
#include <core/pose/Pose.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <basic/Tracer.hh>
#include <basic/database/open.hh>
#include <numeric/MathMatrix.hh>
#include <numeric/MathVector.srlz.hh>
#include <boost/lexical_cast.hpp>
#include <map>
#include <math.h>
#include <set>

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::energy_methods
 

Functions

static basic::Tracer TR ("core.energy_methods.MPResidueLipophilicityEnergy")
 

Detailed Description

Fullatom Smoothed Membrane Environment Energy.

residue speicific enrgy by membrane depth, according to the Elazar hydrophobicity scale . Last Modified: 4/4/16

Author
Jonathan Weinstein (jonat.nosp@m.han..nosp@m.weins.nosp@m.tein.nosp@m.@weiz.nosp@m.mann.nosp@m..ac.i.nosp@m.l)
Assaf Elazar
Sarel Fleishman

Function Documentation

static basic::Tracer TR ( "core.energy_methods.MPResidueLipophilicityEnergy"  )
static