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protocols::loops::loop_mover Namespace Reference

Namespaces

 perturb
 
 refine
 

Classes

class  IndependentLoopMover
 
class  LoopCM
 
class  LoopCMCreator
 
class  LoopMover
 The loop-rebuild protocol. More...
 

Typedefs

typedef
utility::pointer::shared_ptr
< IndependentLoopMover
IndependentLoopMoverOP
 
typedef
utility::pointer::shared_ptr
< IndependentLoopMover const > 
IndependentLoopMoverCOP
 
typedef
utility::pointer::shared_ptr
< LoopCM
LoopCMOP
 
typedef
utility::pointer::shared_ptr
< LoopCM const > 
LoopCMCOP
 
typedef
utility::pointer::weak_ptr
< LoopCM
LoopCMAP
 
typedef
utility::pointer::weak_ptr
< LoopCM const > 
LoopCMCAP
 
typedef
utility::pointer::shared_ptr
< LoopMover
LoopMoverOP
 
typedef
utility::pointer::shared_ptr
< LoopMover const > 
LoopMoverCOP
 
typedef
utility::pointer::weak_ptr
< LoopMover
LoopMoverAP
 
typedef
utility::pointer::weak_ptr
< LoopMover const > 
LoopMoverCAP
 
typedef
utility::pointer::shared_ptr
< MultiLoopMover > 
MultiLoopMoverOP
 
typedef
utility::pointer::shared_ptr
< MultiLoopMover const > 
MultiLoopMoverCOP
 
typedef
utility::pointer::shared_ptr
< SingleLoopMover > 
SingleLoopMoverOP
 
typedef
utility::pointer::shared_ptr
< SingleLoopMover const > 
SingleLoopMoverCOP
 

Enumerations

enum  LoopResult { Success, CriticalFailure, Failure, ExtendFailure }
 

Functions

static basic::Tracer tr ("protocols.loops.loop_mover.LoopCM", basic::t_info)
 
std::string const CCD ("CCD")
 
std::string const KIC ("KIC")
 
std::string const PERTURB ("perturb")
 
std::string const REFINE ("refine")
 
std::string const UNSET ("[NOT SET]")
 
bool ang_delta (core::Real const &a, core::Real const &b)
 
void loops_set_chainbreak_weight (core::scoring::ScoreFunctionOP scorefxn, core::Size const round)
 

Typedef Documentation

typedef utility::pointer::shared_ptr< IndependentLoopMover const > protocols::loops::loop_mover::IndependentLoopMoverCOP
typedef utility::pointer::weak_ptr< LoopCM > protocols::loops::loop_mover::LoopCMAP
typedef utility::pointer::weak_ptr< LoopCM const > protocols::loops::loop_mover::LoopCMCAP
typedef utility::pointer::shared_ptr< LoopCM const > protocols::loops::loop_mover::LoopCMCOP
typedef utility::pointer::shared_ptr< LoopCM > protocols::loops::loop_mover::LoopCMOP
typedef utility::pointer::weak_ptr< LoopMover > protocols::loops::loop_mover::LoopMoverAP
typedef utility::pointer::weak_ptr< LoopMover const > protocols::loops::loop_mover::LoopMoverCAP
typedef utility::pointer::shared_ptr< LoopMover const > protocols::loops::loop_mover::LoopMoverCOP
typedef utility::pointer::shared_ptr< LoopMover > protocols::loops::loop_mover::LoopMoverOP
typedef utility::pointer::shared_ptr< MultiLoopMover const > protocols::loops::loop_mover::MultiLoopMoverCOP
typedef utility::pointer::shared_ptr< MultiLoopMover > protocols::loops::loop_mover::MultiLoopMoverOP
typedef utility::pointer::shared_ptr< SingleLoopMover const > protocols::loops::loop_mover::SingleLoopMoverCOP
typedef utility::pointer::shared_ptr< SingleLoopMover > protocols::loops::loop_mover::SingleLoopMoverOP

Enumeration Type Documentation

Enumerator
Success 
CriticalFailure 
Failure 
ExtendFailure 

Function Documentation

bool protocols::loops::loop_mover::ang_delta ( core::Real const &  a,
core::Real const &  b 
)
std::string const protocols::loops::loop_mover::CCD ( "CCD"  )
std::string const protocols::loops::loop_mover::KIC ( "KIC"  )
void protocols::loops::loop_mover::loops_set_chainbreak_weight ( core::scoring::ScoreFunctionOP  scorefxn,
core::Size const  round 
)
std::string const protocols::loops::loop_mover::PERTURB ( "perturb"  )
std::string const protocols::loops::loop_mover::REFINE ( "refine"  )
static basic::Tracer protocols::loops::loop_mover::tr ( "protocols.loops.loop_mover.LoopCM"  ,
basic::t_info   
)
static
std::string const protocols::loops::loop_mover::UNSET ( ""  [NOT SET])