Rosetta  2021.16
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AlignPDBInfoToSequences.hh File Reference

Realign poses to sequences after losing pdb_info. More...

#include <protocols/pdbinfo_manipulations/AlignPDBInfoToSequences.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/filters/Filter.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <basic/datacache/DataMap.fwd.hh>
#include <utility/json_utilities.hh>

Classes

struct  protocols::pdbinfo_manipulations::SequenceSpecification
 Rosetta defines the pdbinfo of an object via possible chain IDs, segment IDs, and insertion codes. More...
 
class  protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
 Realign poses to sequences after losing pdb_info. More...
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::pdbinfo_manipulations
 

Enumerations

enum  protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesMode { protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesMode::unset, protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesMode::single, protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesMode::multiple }
 

Functions

AlignPDBInfoToSequencesMode protocols::pdbinfo_manipulations::get_alignpdbinfotosequencesmode_from_string (std::string const &str)
 
std::string protocols::pdbinfo_manipulations::alignpdbinfotosequencesmode_to_string (AlignPDBInfoToSequencesMode const &mode)
 
std::ostream & protocols::pdbinfo_manipulations::operator<< (std::ostream &os, SequenceSpecification const &ss)
 
void protocols::pdbinfo_manipulations::to_json (nlohmann::json &j, SequenceSpecification const &ss)
 serialization (json) of SequenceSpecification More...
 
void protocols::pdbinfo_manipulations::from_json (const json &j, SequenceSpecification &ss)
 
std::string protocols::pdbinfo_manipulations::AlignPDBInfoToSequences_namer (std::string const &name)
 
std::ostream & protocols::pdbinfo_manipulations::operator<< (std::ostream &os, AlignPDBInfoToSequences const &mover)
 private methods /// More...
 

Detailed Description

Realign poses to sequences after losing pdb_info.

Author
Dan Farrell (danpf.nosp@m.@uw..nosp@m.edu)