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protocols::calc_taskop_movers Namespace Reference

Classes

class  ConsensusDesignMover
 This mover will modify a given task according to a sequence profile and then call the PackRotamersMover. At every position that is designable in the task, AAs that have a probability > min_aa_probability_ and higher than the native in the sequence profile will be allowed. More...
 
class  ConsensusDesignMoverCreator
 
class  CreateSequenceMotifMover
 Simple mover to Create a sequence motif in a region of protein using the SequenceMotifTaskOperation. Uses psueo-regular expressions to define the motif. More...
 
class  CreateSequenceMotifMoverCreator
 
class  DesignRepackMover
 a pure virtual base class for movers which redesign and repack the interface More...
 
class  ForceDisulfidesMover
 simple mover that fixes disulfides according to a defined list and then simultaneously repacks within 6A shells around each affected cystein residue. More...
 
class  ForceDisulfidesMoverCreator
 

Typedefs

typedef
utility::pointer::shared_ptr
< ConsensusDesignMover
ConsensusDesignMoverOP
 
typedef
utility::pointer::shared_ptr
< CreateSequenceMotifMover
CreateSequenceMotifMoverOP
 
typedef
utility::pointer::shared_ptr
< CreateSequenceMotifMover
const > 
CreateSequenceMotifMoverCOP
 
typedef
utility::pointer::shared_ptr
< DesignRepackMover
DesignRepackMoverOP
 
typedef
utility::pointer::shared_ptr
< DesignRepackMover const > 
DesignRepackMoverCOP
 
typedef
utility::pointer::shared_ptr
< ForceDisulfidesMover
ForceDisulfideMoverOP
 
typedef
utility::pointer::shared_ptr
< ForceDisulfidesMover const > 
ForceDisulfideMoverCOP
 

Functions

std::ostream & operator<< (std::ostream &os, CreateSequenceMotifMover const &mover)
 private methods /// More...
 
static basic::Tracer TR ("protocols.simple_moves.ForceDisulfidesMover")
 

Typedef Documentation

typedef utility::pointer::shared_ptr< DesignRepackMover const > protocols::calc_taskop_movers::DesignRepackMoverCOP
typedef utility::pointer::shared_ptr< ForceDisulfidesMover const > protocols::calc_taskop_movers::ForceDisulfideMoverCOP

Function Documentation

std::ostream & protocols::calc_taskop_movers::operator<< ( std::ostream &  os,
CreateSequenceMotifMover const &  mover 
)
static basic::Tracer protocols::calc_taskop_movers::TR ( "protocols.simple_moves.ForceDisulfidesMover"  )
static