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ConsensusLoopDesignOperation.cc File Reference

Restrict loop residue identities to those commonly found in nature. More...

#include <protocols/denovo_design/task_operations/ConsensusLoopDesignOperation.hh>
#include <protocols/denovo_design/task_operations/ConsensusLoopDesignOperationCreator.hh>
#include <protocols/denovo_design/util.hh>
#include <protocols/parser/BluePrint.hh>
#include <core/chemical/ResidueType.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/ResidueLevelTask.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/select/residue_selector/SecondaryStructureSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/sequence/ABEGOManager.hh>
#include <basic/database/open.hh>
#include <basic/Tracer.hh>
#include <utility/io/izstream.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <core/pack/task/operation/task_op_schemas.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::denovo_design
 
 protocols::denovo_design::task_operations
 

Functions

static basic::Tracer TR ("protocols.denovo_design.task_operations.ConsensusLoopDesignOperation")
 
utility::vector1< boolprotocols::denovo_design::task_operations::make_aa_bitmap_from_forbidden_aas (std::string const &forbidden_aas)
 
utility::vector1< boolprotocols::denovo_design::task_operations::make_aa_bitmap_from_allowed_aas (std::string const &allowed_aas)
 
std::ostream & protocols::denovo_design::task_operations::operator<< (std::ostream &os, SurroundingSS const &ss)
 
std::ostream & protocols::denovo_design::task_operations::operator<< (std::ostream &os, LoopInfo const &info)
 

Detailed Description

Restrict loop residue identities to those commonly found in nature.

Author
Tom Linsky (tlins.nosp@m.ky@u.nosp@m.w.edu)

Function Documentation

static basic::Tracer TR ( "protocols.denovo_design.task_operations.ConsensusLoopDesignOperation"  )
static