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Namespaces | Functions
util.cc File Reference
#include <protocols/stepwise/monte_carlo/util.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <protocols/stepwise/modeler/protein/InputStreamWithResidueInfo.hh>
#include <protocols/stepwise/monte_carlo/options/StepWiseMonteCarloOptions.hh>
#include <protocols/stepwise/monte_carlo/mover/StepWiseMasterMover.hh>
#include <protocols/stepwise/monte_carlo/mover/StepWiseMove.hh>
#include <core/types.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <core/io/silent/util.hh>
#include <core/pose/full_model_info/util.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <core/pose/rna/util.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/rna/util.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/format.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/rna.OptionKeys.gen.hh>
#include <basic/Tracer.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::monte_carlo
 

Functions

static basic::Tracer TR ("protocols.stepwise.monte_carlo.util")
 
void protocols::stepwise::monte_carlo::output_to_silent_file (std::string const &out_tag, std::string const &silent_file, pose::Pose &pose, pose::PoseCOP native_pose, bool const superimpose_over_all_instantiated, bool const do_rms_fill_calculation)
 
core::io::silent::SilentStructOP protocols::stepwise::monte_carlo::prepare_silent_struct (std::string const &out_tag, pose::Pose &pose, pose::PoseCOP native_pose, bool const superimpose_over_all_instantiated, bool const do_rms_fill_calculation, core::pose::PoseOP full_model_pose)
 
void protocols::stepwise::monte_carlo::output_to_silent_file (std::string const &out_tag, std::string const &silent_file, pose::Pose const &pose)
 
void protocols::stepwise::monte_carlo::output_to_silent_file (std::string const &silent_file, utility::vector1< pose::PoseOP > &pose_list, pose::PoseCOP native_pose)
 
void protocols::stepwise::monte_carlo::build_full_model (pose::Pose const &start_pose, pose::Pose &full_model_pose, bool const &enumerate, Real const &skip_bulge_freq)
 
core::pose::PoseOP protocols::stepwise::monte_carlo::build_full_model (pose::Pose const &start_pose)
 
std::string protocols::stepwise::monte_carlo::get_move_type_string (mover::StepWiseMove const &swa_move)
 
std::string protocols::stepwise::monte_carlo::get_all_res_list (pose::Pose &pose)
 

Function Documentation

static basic::Tracer TR ( "protocols.stepwise.monte_carlo.util"  )
static