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protocols::antibody::task_operations::DisableAntibodyRegionOperation Class Reference

A TaskOperation that Disables packing +/or design of a particular antibody region. By Default, disables packing and design of the cdr_region. Make sure to set the region you want disabled. More...

#include <DisableAntibodyRegionOperation.hh>

Inheritance diagram for protocols::antibody::task_operations::DisableAntibodyRegionOperation:
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Public Member Functions

 DisableAntibodyRegionOperation ()
 Default constructor. Do not use this. More...
 
 DisableAntibodyRegionOperation (AntibodyInfoCOP ab_info)
 Constructor setting only AntibodyInfo. More...
 
 DisableAntibodyRegionOperation (AntibodyInfoCOP ab_info, AntibodyRegionEnum region)
 Constructor setting AntibodyInfo and the region. More...
 
 DisableAntibodyRegionOperation (AntibodyInfoCOP ab_info, AntibodyRegionEnum region, bool disable_packing_and_design)
 Constructor setting the region and to fully disable the region. If disable_packing_and_design is set to False, will only disable design. More...
 
 DisableAntibodyRegionOperation (DisableAntibodyRegionOperation const &src)
 
 ~DisableAntibodyRegionOperation () override
 
core::pack::task::operation::TaskOperationOP clone () const override
 Create another task operation of the type matching the most-derived version of the class. More...
 
void parse_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
 Configure from a RosettaScripts XML tag. More...
 
void apply (core::pose::Pose const &pose, core::pack::task::PackerTask &task) const override
 Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
 
void set_region (AntibodyRegionEnum region)
 
void set_disable_packing_and_design (bool disable_packing_and_design)
 If disable_packing_and_design is set to False, will only disable design. More...
 
void set_defaults ()
 
- Public Member Functions inherited from core::pack::task::operation::TaskOperation
 ~TaskOperation () override
 
virtual void provide_citation_info (basic::citation_manager::CitationCollectionList &) const
 Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...
 

Static Public Member Functions

static std::string keyname ()
 
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 

Private Attributes

AntibodyInfoCOP ab_info_
 
AntibodyRegionEnum region_
 
bool disable_packing_and_design_
 
AntibodyNumberingSchemeEnum numbering_scheme_
 Needed for default and RS constructor. More...
 
CDRDefinitionEnum cdr_definition_
 

Additional Inherited Members

- Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP TagCOP
 
typedef basic::datacache::DataMap DataMap
 
typedef pose::Pose Pose
 

Detailed Description

A TaskOperation that Disables packing +/or design of a particular antibody region. By Default, disables packing and design of the cdr_region. Make sure to set the region you want disabled.

Constructor & Destructor Documentation

protocols::antibody::task_operations::DisableAntibodyRegionOperation::DisableAntibodyRegionOperation ( )

Default constructor. Do not use this.

References set_defaults().

protocols::antibody::task_operations::DisableAntibodyRegionOperation::DisableAntibodyRegionOperation ( AntibodyInfoCOP  ab_info)

Constructor setting only AntibodyInfo.

References set_defaults().

protocols::antibody::task_operations::DisableAntibodyRegionOperation::DisableAntibodyRegionOperation ( AntibodyInfoCOP  ab_info,
AntibodyRegionEnum  region 
)

Constructor setting AntibodyInfo and the region.

References region_, and set_defaults().

protocols::antibody::task_operations::DisableAntibodyRegionOperation::DisableAntibodyRegionOperation ( AntibodyInfoCOP  ab_info,
AntibodyRegionEnum  region,
bool  disable_packing_and_design 
)

Constructor setting the region and to fully disable the region. If disable_packing_and_design is set to False, will only disable design.

References disable_packing_and_design_, region_, and set_defaults().

protocols::antibody::task_operations::DisableAntibodyRegionOperation::DisableAntibodyRegionOperation ( DisableAntibodyRegionOperation const &  src)

References ab_info_.

protocols::antibody::task_operations::DisableAntibodyRegionOperation::~DisableAntibodyRegionOperation ( )
overridedefault

Member Function Documentation

void protocols::antibody::task_operations::DisableAntibodyRegionOperation::apply ( core::pose::Pose const &  ,
core::pack::task::PackerTask  
) const
overridevirtual
TaskOperationOP protocols::antibody::task_operations::DisableAntibodyRegionOperation::clone ( ) const
overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

std::string protocols::antibody::task_operations::DisableAntibodyRegionOperation::keyname ( )
static
void protocols::antibody::task_operations::DisableAntibodyRegionOperation::parse_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &   
)
overridevirtual
void protocols::antibody::task_operations::DisableAntibodyRegionOperation::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static
void protocols::antibody::task_operations::DisableAntibodyRegionOperation::set_defaults ( )
void protocols::antibody::task_operations::DisableAntibodyRegionOperation::set_disable_packing_and_design ( bool  disable_packing_and_design)

If disable_packing_and_design is set to False, will only disable design.

References disable_packing_and_design_.

void protocols::antibody::task_operations::DisableAntibodyRegionOperation::set_region ( AntibodyRegionEnum  region)

References region_.

Member Data Documentation

AntibodyInfoCOP protocols::antibody::task_operations::DisableAntibodyRegionOperation::ab_info_
private
CDRDefinitionEnum protocols::antibody::task_operations::DisableAntibodyRegionOperation::cdr_definition_
private

Referenced by apply(), parse_tag(), and set_defaults().

bool protocols::antibody::task_operations::DisableAntibodyRegionOperation::disable_packing_and_design_
private
AntibodyNumberingSchemeEnum protocols::antibody::task_operations::DisableAntibodyRegionOperation::numbering_scheme_
private

Needed for default and RS constructor.

Referenced by apply(), parse_tag(), and set_defaults().

AntibodyRegionEnum protocols::antibody::task_operations::DisableAntibodyRegionOperation::region_
private

The documentation for this class was generated from the following files: