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protocols::denovo_design::architects::CompoundArchitect Class Reference

Architect that creates a StructureData using multiple architects. More...

#include <CompoundArchitect.hh>

Inheritance diagram for protocols::denovo_design::architects::CompoundArchitect:
Inheritance graph
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Public Types

typedef
protocols::denovo_design::architects::DeNovoArchitect 
DeNovoArchitect
 
typedef
protocols::denovo_design::architects::DeNovoArchitectOP 
DeNovoArchitectOP
 
typedef
protocols::denovo_design::components::StructureData 
StructureData
 
typedef
protocols::denovo_design::components::StructureDataOP 
StructureDataOP
 
- Public Types inherited from protocols::denovo_design::architects::DeNovoArchitect
typedef components::StructureDataOP StructureDataOP
 

Public Member Functions

 CompoundArchitect (std::string const &id_value)
 
 ~CompoundArchitect () override
 
std::string type () const override
 simply returns the name of this type of architect More...
 
DeNovoArchitectOP clone () const override
 
StructureDataOP design (core::pose::Pose const &pose, core::Real &random) const override
 
void add_architect (DeNovoArchitect const &architect)
 
void add_connection (connection::ConnectionArchitect const &connection)
 
- Public Member Functions inherited from protocols::denovo_design::architects::DeNovoArchitect
 DeNovoArchitect (std::string const &id)
 
 ~DeNovoArchitect () override
 
components::StructureDataOP apply (core::pose::Pose const &pose) const
 
- Public Member Functions inherited from protocols::denovo_design::architects::StructureArchitect
 StructureArchitect (std::string const &id)
 
 ~StructureArchitect () override
 
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data)
 
std::string const & id () const
 
void set_id (std::string const &new_id)
 

Static Public Member Functions

static std::string class_name ()
 
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 
static std::string subelement_ct_namer (std::string)
 
static std::string pairing_subelement_ct_namer (std::string)
 
static std::string pairing_group_namer ()
 
static void define_pairing_group (utility::tag::XMLSchemaDefinition &)
 
- Static Public Member Functions inherited from protocols::denovo_design::architects::DeNovoArchitect
static void add_common_denovo_architect_attributes (utility::tag::AttributeList &attlist)
 
- Static Public Member Functions inherited from protocols::denovo_design::architects::StructureArchitect
static void attributes_for_parse_my_tag (utility::tag::AttributeList &attlist)
 

Protected Member Functions

void parse_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data) override
 Configuration by XML. More...
 

Static Protected Member Functions

static void attributes_for_parse_my_tag (utility::tag::AttributeList &attlist)
 

Private Member Functions

void parse_architect_tags (utility::tag::TagCOP tag, basic::datacache::DataMap &data)
 
void parse_architect_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data)
 
void parse_connection_tags (utility::tag::TagCOP tag, basic::datacache::DataMap &data)
 
void parse_connection_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data)
 
void parse_pairing_tags (utility::tag::Tag const &tag)
 
void parse_pairing_tag (utility::tag::Tag const &tag)
 
void add_parent_name (StructureArchitect &architect) const
 

Private Attributes

DeNovoArchitectCOPs architects_
 
connection::ConnectionArchitectCOPs connections_
 
components::SegmentPairingCOPs pairings_
 

Additional Inherited Members

- Static Public Attributes inherited from protocols::denovo_design::architects::DeNovoArchitect
static std::string const DATA_MAP_NAME = "DeNovoArchitects"
 

Detailed Description

Architect that creates a StructureData using multiple architects.

Member Typedef Documentation

Constructor & Destructor Documentation

protocols::denovo_design::architects::CompoundArchitect::CompoundArchitect ( std::string const &  id_value)
protocols::denovo_design::architects::CompoundArchitect::~CompoundArchitect ( )
overridedefault

Member Function Documentation

void protocols::denovo_design::architects::CompoundArchitect::add_architect ( DeNovoArchitect const &  architect)
void protocols::denovo_design::architects::CompoundArchitect::add_connection ( connection::ConnectionArchitect const &  connection)
void protocols::denovo_design::architects::CompoundArchitect::add_parent_name ( StructureArchitect architect) const
private
static void protocols::denovo_design::architects::CompoundArchitect::attributes_for_parse_my_tag ( utility::tag::AttributeList &  attlist)
staticprotected
static std::string protocols::denovo_design::architects::CompoundArchitect::class_name ( )
inlinestatic
CompoundArchitect::DeNovoArchitectOP protocols::denovo_design::architects::CompoundArchitect::clone ( ) const
overridevirtual
void protocols::denovo_design::architects::CompoundArchitect::define_pairing_group ( utility::tag::XMLSchemaDefinition &  xsd)
static
CompoundArchitect::StructureDataOP protocols::denovo_design::architects::CompoundArchitect::design ( core::pose::Pose const &  pose,
core::Real random 
) const
overridevirtual
std::string protocols::denovo_design::architects::CompoundArchitect::pairing_group_namer ( )
static
std::string protocols::denovo_design::architects::CompoundArchitect::pairing_subelement_ct_namer ( std::string  tag_name)
static
void protocols::denovo_design::architects::CompoundArchitect::parse_architect_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &  data 
)
private

References architects_.

Referenced by parse_architect_tags().

void protocols::denovo_design::architects::CompoundArchitect::parse_architect_tags ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &  data 
)
private
void protocols::denovo_design::architects::CompoundArchitect::parse_connection_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &  data 
)
private
void protocols::denovo_design::architects::CompoundArchitect::parse_connection_tags ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &  data 
)
private
void protocols::denovo_design::architects::CompoundArchitect::parse_pairing_tag ( utility::tag::Tag const &  tag)
private
void protocols::denovo_design::architects::CompoundArchitect::parse_pairing_tags ( utility::tag::Tag const &  tag)
private
void protocols::denovo_design::architects::CompoundArchitect::parse_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &  data 
)
overrideprotectedvirtual
void protocols::denovo_design::architects::CompoundArchitect::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static
std::string protocols::denovo_design::architects::CompoundArchitect::subelement_ct_namer ( std::string  tag_name)
static

Referenced by provide_xml_schema().

std::string protocols::denovo_design::architects::CompoundArchitect::type ( ) const
overridevirtual

simply returns the name of this type of architect

Implements protocols::denovo_design::architects::DeNovoArchitect.

References class_name().

Referenced by parse_tag().

Member Data Documentation

DeNovoArchitectCOPs protocols::denovo_design::architects::CompoundArchitect::architects_
private
connection::ConnectionArchitectCOPs protocols::denovo_design::architects::CompoundArchitect::connections_
private
components::SegmentPairingCOPs protocols::denovo_design::architects::CompoundArchitect::pairings_
private

Referenced by design(), and parse_pairing_tag().


The documentation for this class was generated from the following files: