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RotamerSet_.cc File Reference

amino acid rotamer set class implementation More...

#include <core/pack/rotamer_set/RotamerSet_.hh>
#include <core/pack/rotamer_set/RotamerSetOperation.hh>
#include <core/pack/rotamer_set/rotamer_building_functions.hh>
#include <core/pack/rotamer_set/water_rotamer_building_functions.hh>
#include <core/pack/rotamer_set/rna_rotamer_building_functions.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/RotamerSampleOptions.hh>
#include <core/pack/dunbrack/RotamerLibrary.hh>
#include <core/pack/dunbrack/RotamerLibraryScratchSpace.hh>
#include <core/pack/dunbrack/ChiSet.hh>
#include <core/pack/dunbrack/DunbrackRotamer.hh>
#include <core/pack/rotamers/SingleResidueRotamerLibrary.hh>
#include <core/pack/interaction_graph/SurfacePotential.hh>
#include <core/pack/rotamers/SingleResidueRotamerLibraryFactory.hh>
#include <core/pack/rotamers/SingleBasicRotamerLibrary.hh>
#include <core/pack/rotamer_set/WaterAnchorInfo.hh>
#include <core/pack/rotamer_set/WaterPackingInfo.hh>
#include <core/pack/rotamer_set/RotamerSets.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/conformation/Atom.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/Residue.functions.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/AbstractRotamerTrie.hh>
#include <core/scoring/LREnergyContainer.hh>
#include <core/scoring/methods/LongRangeTwoBodyEnergy.hh>
#include <core/scoring/methods/Methods.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/TenANeighborGraph.hh>
#include <core/scoring/ScoreFunction.hh>
#include <utility/graph/Graph.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <basic/options/keys/corrections.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/hydrate.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <list>
#include <string>
#include <iostream>

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::pack
 
 core::pack::rotamer_set
 

Functions

static basic::Tracer core::pack::rotamer_set::tt ("core.pack.rotamer_set.RotamerSet_")
 
bool core::pack::rotamer_set::different_restype (core::chemical::ResidueType const &rt1, core::chemical::ResidueType const &rt2)
 should two residue types be considered the same residue type? More...
 
bool core::pack::rotamer_set::different_resgroup (core::chemical::ResidueType const &rt1, core::chemical::ResidueType const &rt2)
 should two residue types be considered to belong to the same residue-type group? More...
 
void core::pack::rotamer_set::sort_new_rotamers_into_rotset_vector (utility::vector1< conformation::ResidueOP > &rotamers, std::list< conformation::ResidueOP > &rotamers_waiting_for_sort, core::Size &id_for_current_rotamer)
 

Detailed Description

amino acid rotamer set class implementation

Author
Andrew Leaver-Fay (leave.nosp@m.rfa@.nosp@m.email.nosp@m..unc.nosp@m..edu)