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Classes | Typedefs | Functions
protocols::denovo_design::connection Namespace Reference

Classes

class  ConnectionArchitect
 Architect for covalently joining two segments of a pose. More...
 
class  AreConnectablePredicate
 
class  EXCN_ConnectionSetupFailed
 

Typedefs

typedef utility::pointer::shared_ptr< ConnectionArchitectConnectionArchitectOP
 
typedef utility::pointer::shared_ptr< ConnectionArchitect const > ConnectionArchitectCOP
 
typedef utility::vector1< ConnectionArchitectCOPConnectionArchitectCOPs
 
typedef components::Segment Motif
 
typedef components::SegmentOP MotifOP
 
typedef components::SegmentCOP MotifCOP
 
typedef utility::vector1< MotifOPMotifOPs
 
typedef utility::vector1< MotifCOPMotifCOPs
 
typedef utility::pointer::shared_ptr< AreConnectablePredicateAreConnectablePredicateOP
 
typedef utility::pointer::shared_ptr< AreConnectablePredicate const > AreConnectablePredicateCOP
 

Functions

SegmentNames parse_segment_names (std::string const &segment_name_str)
 
core::Real calc_approx_loop_length (std::string const &abego)
 
ConnectionArchitectCOP retrieve_connection_architect (std::string const &architect_name, basic::datacache::DataMap &data)
 
void store_connection_architect (ConnectionArchitectOP architect, basic::datacache::DataMap &data)
 

Typedef Documentation

◆ AreConnectablePredicateCOP

◆ AreConnectablePredicateOP

◆ ConnectionArchitectCOP

◆ ConnectionArchitectCOPs

◆ ConnectionArchitectOP

◆ Motif

◆ MotifCOP

◆ MotifCOPs

◆ MotifOP

◆ MotifOPs

Function Documentation

◆ calc_approx_loop_length()

core::Real protocols::denovo_design::connection::calc_approx_loop_length ( std::string const &  abego)

◆ parse_segment_names()

SegmentNames protocols::denovo_design::connection::parse_segment_names ( std::string const &  segment_name_str)

◆ retrieve_connection_architect()

ConnectionArchitectCOP protocols::denovo_design::connection::retrieve_connection_architect ( std::string const &  architect_name,
basic::datacache::DataMap data 
)

◆ store_connection_architect()

void protocols::denovo_design::connection::store_connection_architect ( ConnectionArchitectOP  architect,
basic::datacache::DataMap data 
)