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Namespaces | Functions
StructureData.cc File Reference
#include <protocols/denovo_design/components/StructureData.hh>
#include <protocols/denovo_design/components/StructureDataCreator.hh>
#include <protocols/denovo_design/components/FoldGraph.hh>
#include <protocols/denovo_design/components/Segment.hh>
#include <protocols/denovo_design/components/SegmentPairing.hh>
#include <protocols/denovo_design/components/StructureDataFactory.hh>
#include <protocols/denovo_design/components/StructureDataObserver.hh>
#include <protocols/denovo_design/util.hh>
#include <protocols/constraint_generator/ConstraintGenerator.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/moves/Mover.hh>
#include <core/chemical/VariantType.hh>
#include <core/conformation/Conformation.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/Pose.hh>
#include <core/io/Remarks.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/pose/datacache/CacheableObserver.fwd.hh>
#include <core/pose/datacache/CacheableObserverType.hh>
#include <core/pose/datacache/ObserverCache.hh>
#include <core/pose/symmetry/util.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/sequence/ABEGOManager.hh>
#include <basic/Tracer.hh>
#include <utility>
#include <utility/exit.hh>
#include <utility/string_util.hh>
#include <utility/tag/Tag.hh>
#include <boost/algorithm/string.hpp>
#include <boost/lexical_cast.hpp>
#include <algorithm>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::denovo_design
 
 protocols::denovo_design::components
 

Functions

static basic::Tracer TR ("protocols.denovo_design.components.StructureData")
 
std::ostream & protocols::denovo_design::components::operator<< (std::ostream &os, BondInfo const &b)
 
template<class T >
void protocols::denovo_design::components::set_map_data (std::map< std::string, T > &map, std::string const &key, T const &value, bool const overwrite)
 
utility::vector1< core::Sizeprotocols::denovo_design::components::compute_cutpoints (core::pose::Pose const &pose)
 
utility::vector1< core::Sizeprotocols::denovo_design::components::compute_chain_beginnings (core::pose::Pose const &pose)
 
void protocols::denovo_design::components::advance_past_virtual_residues (core::pose::Pose const &pose, utility::vector1< core::Size >::const_iterator &cur_resid, utility::vector1< core::Size >::const_iterator const &end_resids)
 
std::ostream & protocols::denovo_design::components::operator<< (std::ostream &os, StructureData const &perm)
 output More...
 
std::ostream & protocols::denovo_design::components::operator<< (std::ostream &os, Alias const &alias)
 

Function Documentation

static basic::Tracer TR ( "protocols.denovo_design.components.StructureData"  )
static