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protocols::pose_creation::MakeJunctionsMover Member List

This is the complete list of members for protocols::pose_creation::MakeJunctionsMover, including all inherited members.

apply(core::pose::Pose &pose) overrideprotocols::pose_creation::MakeJunctionsMovervirtual
assign_seq(core::pose::Pose &pose, std::string n_term_seq, std::string c_term_seq)protocols::pose_creation::MakeJunctionsMover
attach_next_part(core::pose::Pose &pose, std::string attach_termini, std::string attach_description)protocols::pose_creation::MakeJunctionsMover
chain_protocols::pose_creation::MakeJunctionsMoverprivate
check_all_junctions_good(MakeJunctionsMover::Design design)protocols::pose_creation::MakeJunctionsMover
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::pose_creation::MakeJunctionsMovervirtual
create()protocols::moves::Movervirtual
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
design_q_protocols::pose_creation::MakeJunctionsMoverprivate
designs_fn_protocols::pose_creation::MakeJunctionsMoverprivate
fresh_instance() const overrideprotocols::pose_creation::MakeJunctionsMovervirtual
generate_start_pose(core::pose::Pose &pose, core::pose::Pose &background_pose, std::string attach_description)protocols::pose_creation::MakeJunctionsMover
get_additional_output() overrideprotocols::pose_creation::MakeJunctionsMovervirtual
get_and_cache_pdb(std::string pdb_location)protocols::pose_creation::MakeJunctionsMover
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::pose_creation::MakeJunctionsMovervirtual
get_native_pose() constprotocols::moves::Mover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
input_pose_protocols::moves::Moverprivate
junction_failure_set_protocols::pose_creation::MakeJunctionsMoverprivate
junction_rmsd_thresh_protocols::pose_creation::MakeJunctionsMoverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
line_to_design(std::string line)protocols::pose_creation::MakeJunctionsMover
make_pose_from_design(MakeJunctionsMover::Design design, core::pose::PoseOP &return_pose)protocols::pose_creation::MakeJunctionsMover
MakeJunctionsMover()protocols::pose_creation::MakeJunctionsMover
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::pose_creation::MakeJunctionsMoverstatic
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
parse_attach_description(std::string attach_description, std::string &pdb_location, char &chain, core::Size &n_term_trim, core::Size &c_term_trim, core::Size &n_repeats, core::Size &n_term_attach_length, core::Size &c_term_attach_length, std::string &n_term_seq, std::string &c_term_seq)protocols::pose_creation::MakeJunctionsMover
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &datamap) overrideprotocols::pose_creation::MakeJunctionsMovervirtual
pdb_cache_protocols::pose_creation::MakeJunctionsMoverprivate
pdb_cache_bool_protocols::pose_creation::MakeJunctionsMoverprivate
pdb_cache_max_size_protocols::pose_creation::MakeJunctionsMoverprivate
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) constprotocols::moves::Movervirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::pose_creation::MakeJunctionsMoverstatic
read_in_designs()protocols::pose_creation::MakeJunctionsMover
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() constprotocols::moves::Movervirtual
reset_status()protocols::moves::Mover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_type(std::string const &setting)protocols::moves::Moverinline
sfxn_protocols::pose_creation::MakeJunctionsMoverprivate
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
trim_pose(core::pose::Pose &pose, core::Size n_term_trim, core::Size c_term_trim)protocols::pose_creation::MakeJunctionsMover
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate