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protocols::enzdes::EnzRepackMinimize Member List

This is the complete list of members for protocols::enzdes::EnzRepackMinimize, including all inherited members.

apply(core::pose::Pose &pose) overrideprotocols::enzdes::EnzRepackMinimizevirtual
backrub_protocols::enzdes::EnzRepackMinimizeprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::enzdes::EnzRepackMinimizevirtual
create()protocols::moves::Movervirtual
create_ptask(core::pose::Pose &pose)protocols::enzdes::EnzRepackMinimize
cst_opt_protocols::enzdes::EnzRepackMinimizeprivate
design_protocols::enzdes::EnzRepackMinimizeprivate
ensure_scofx_cstfication(core::pose::Pose const &pose)protocols::enzdes::EnzRepackMinimize
EnzRepackMinimize()protocols::enzdes::EnzRepackMinimize
EnzRepackMinimize(std::string const &name)protocols::enzdes::EnzRepackMinimize
fix_catalytic_protocols::enzdes::EnzRepackMinimizeprivate
fresh_instance() const overrideprotocols::enzdes::EnzRepackMinimizevirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_design() const protocols::enzdes::EnzRepackMinimizeinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_min_bb() const protocols::enzdes::EnzRepackMinimizeinline
get_min_lig() const protocols::enzdes::EnzRepackMinimizeinline
get_min_rb() const protocols::enzdes::EnzRepackMinimizeinline
get_min_sc() const protocols::enzdes::EnzRepackMinimizeinline
get_name() const overrideprotocols::enzdes::EnzRepackMinimizevirtual
get_native_pose() const protocols::moves::Mover
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
min_bb_protocols::enzdes::EnzRepackMinimizeprivate
min_lig_protocols::enzdes::EnzRepackMinimizeprivate
min_rb_protocols::enzdes::EnzRepackMinimizeprivate
min_sc_protocols::enzdes::EnzRepackMinimizeprivate
minimize_in_stages(core::pose::Pose &pose, core::pack::task::PackerTaskCOP task, bool const &cstopt, bool const &min_sc, bool const &min_rb, bool const &min_lig)protocols::enzdes::EnzRepackMinimize
minimize_in_stages_protocols::enzdes::EnzRepackMinimizeprivate
minimize_prot_jumps_protocols::enzdes::EnzRepackMinimizeprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::enzdes::EnzRepackMinimizestatic
n_cycles_protocols::enzdes::EnzRepackMinimizeprivate
name()protocols::moves::Moverinlinestatic
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) overrideprotocols::enzdes::EnzRepackMinimizevirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::enzdes::EnzRepackMinimizestatic
rb_min_jumps() const protocols::enzdes::EnzRepackMinimize
rb_min_jumps(utility::vector1< core::Size > const )protocols::enzdes::EnzRepackMinimize
rb_min_jumps_protocols::enzdes::EnzRepackMinimizeprivate
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
repack_protocols::enzdes::EnzRepackMinimizeprivate
reset_status()protocols::moves::Mover
scorefxn_minimize() const protocols::enzdes::EnzRepackMinimize
scorefxn_minimize_protocols::enzdes::EnzRepackMinimizeprivate
scorefxn_repack() const protocols::enzdes::EnzRepackMinimize
scorefxn_repack_protocols::enzdes::EnzRepackMinimizeprivate
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_design(bool const des)protocols::enzdes::EnzRepackMinimizeinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_min_bb(bool const min_bb)protocols::enzdes::EnzRepackMinimizeinline
set_min_lig(bool const min_lig)protocols::enzdes::EnzRepackMinimizeinline
set_min_rb(bool const min_rb)protocols::enzdes::EnzRepackMinimizeinline
set_min_sc(bool const min_sc)protocols::enzdes::EnzRepackMinimizeinline
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_scorefxn_minimize(core::scoring::ScoreFunctionCOP scorefxn)protocols::enzdes::EnzRepackMinimize
set_scorefxn_repack(core::scoring::ScoreFunctionCOP scorefxn)protocols::enzdes::EnzRepackMinimize
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) const protocols::moves::Movervirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
task_protocols::enzdes::EnzRepackMinimizeprivate
task_factory(core::pack::task::TaskFactoryOP p)protocols::enzdes::EnzRepackMinimize
task_factory_protocols::enzdes::EnzRepackMinimizeprivate
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
~EnzRepackMinimize() overrideprotocols::enzdes::EnzRepackMinimize