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Public Member Functions | Private Attributes | List of all members
core::scoring::rna::RNP_LowResPotential Class Reference

#include <RNP_LowResPotential.hh>

Inheritance diagram for core::scoring::rna::RNP_LowResPotential:
Inheritance graph
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Public Member Functions

 RNP_LowResPotential ()
 c-tor More...
 
void initialize_rnp_base_pair ()
 
void initialize_rnp_pair ()
 
void initialize_rnp_aa_rna_backbone ()
 
void evaluate_rnp_base_pair_score (conformation::Residue const &rsd1, conformation::Residue const &rsd2, Real const &x, Real const &y, Real &rnp_bp_score) const
 
Real evaluate_rnp_aa_rna_backbone_score (conformation::Residue const &protein_rsd, Real const &dist_to_backbone) const
 
void evaluate_rnp_pair_score (conformation::Residue const &rsd1, conformation::Residue const &rsd2, bool const &rsd1_is_interface, bool const &rsd1_is_buried, bool const &rsd2_is_interface, bool const &rsd2_is_buried, Real const &d, Real &rnp_pair_score) const
 

Private Attributes

Size const max_aa_
 
Size const max_base_
 
Size const num_xbins_
 
Size const num_ybins_
 
Size const num_dbins_
 
Size const num_backbone_dbins_
 
ObjexxFCL::FArray4D< Realrnp_basepair_xy_
 
ObjexxFCL::FArray3D< Realrnp_pair_base_interface_protein_buried_
 
ObjexxFCL::FArray3D< Realrnp_pair_base_interface_protein_notburied_
 
ObjexxFCL::FArray2D< Realrnp_aa_rna_backbone_
 

Constructor & Destructor Documentation

core::scoring::rna::RNP_LowResPotential::RNP_LowResPotential ( )

Member Function Documentation

Real core::scoring::rna::RNP_LowResPotential::evaluate_rnp_aa_rna_backbone_score ( conformation::Residue const &  protein_rsd,
Real const &  dist_to_backbone 
) const
void core::scoring::rna::RNP_LowResPotential::evaluate_rnp_base_pair_score ( conformation::Residue const &  rsd1,
conformation::Residue const &  rsd2,
Real const &  x,
Real const &  y,
Real rnp_bp_score 
) const
void core::scoring::rna::RNP_LowResPotential::evaluate_rnp_pair_score ( conformation::Residue const &  rsd1,
conformation::Residue const &  rsd2,
bool const &  rsd1_is_interface,
bool const &  rsd1_is_buried,
bool const &  rsd2_is_interface,
bool const &  rsd2_is_buried,
Real const &  d,
Real rnp_pair_score 
) const
void core::scoring::rna::RNP_LowResPotential::initialize_rnp_aa_rna_backbone ( )
void core::scoring::rna::RNP_LowResPotential::initialize_rnp_base_pair ( )
void core::scoring::rna::RNP_LowResPotential::initialize_rnp_pair ( )

Member Data Documentation

Size const core::scoring::rna::RNP_LowResPotential::max_aa_
private
Size const core::scoring::rna::RNP_LowResPotential::max_base_
private
Size const core::scoring::rna::RNP_LowResPotential::num_backbone_dbins_
private
Size const core::scoring::rna::RNP_LowResPotential::num_dbins_
private
Size const core::scoring::rna::RNP_LowResPotential::num_xbins_
private
Size const core::scoring::rna::RNP_LowResPotential::num_ybins_
private
ObjexxFCL::FArray2D< Real > core::scoring::rna::RNP_LowResPotential::rnp_aa_rna_backbone_
private
ObjexxFCL::FArray4D< Real > core::scoring::rna::RNP_LowResPotential::rnp_basepair_xy_
private
ObjexxFCL::FArray3D< Real > core::scoring::rna::RNP_LowResPotential::rnp_pair_base_interface_protein_buried_
private
ObjexxFCL::FArray3D< Real > core::scoring::rna::RNP_LowResPotential::rnp_pair_base_interface_protein_notburied_
private

The documentation for this class was generated from the following files: