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Blosum62Map.hh File Reference

Creates a std::unordered_map that maps a char pair of name1s to their BLOSUM62 score. More...

#include <unordered_map>
#include <core/types.hh>
#include <utility/vector1.hh>
#include <utility>
#include <basic/Tracer.hh>

Classes

struct  core::sequence::CharPairHash
 
struct  core::sequence::Blosum62Map
 

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::sequence
 

Functions

static basic::Tracer blosum_62_map_tr ("core.sequence.Blosum62Map")
 
std::unordered_map< std::pair
< char, char >, int,
CharPairHash > 
core::sequence::create_map_for_Blosum62Map ()
 

Detailed Description

Creates a std::unordered_map that maps a char pair of name1s to their BLOSUM62 score.

Author
Jack Maguire, jackm.nosp@m.agui.nosp@m.re144.nosp@m.4@gm.nosp@m.ail.c.nosp@m.om

Function Documentation

static basic::Tracer blosum_62_map_tr ( "core.sequence.Blosum62Map"  )
static