Rosetta  2021.16
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forge → core Relation

File in src/protocols/forgeIncludes file in src/core
components / BDR.ccchemical / AA.hh
components / BDR.ccpose / annotated_sequence.hh
components / BDR.ccpose / metrics / CalculatorFactory.hh
components / BDR.ccscoring / dssp / Dssp.hh
components / BDR.ccscoring / Energies.hh
components / BDR.cckinematics / FoldTree.hh
components / BDR.ccpack / task / operation / NoRepackDisulfides.hh
components / BDR.ccpack / task / PackerTask.hh
components / BDR.ccpose / Pose.hh
components / BDR.ccchemical / ResidueTypeSet.hh
components / BDR.ccscoring / ScoreFunction.hh
components / BDR.ccscoring / ScoreFunctionFactory.hh
components / BDR.ccutil / SwitchResidueTypeSet.hh
components / BDR.ccpack / task / TaskFactory.hh
components / BDR.ccpack / task / operation / TaskOperations.hh
components / BDR.hhpose / Pose.fwd.hh
components / BDR.hhscoring / ScoreFunction.fwd.hh
components / BDR.hhpack / task / TaskFactory.fwd.hh
components / BDR.hhtypes.hh
build / Bridge.ccpose / annotated_sequence.hh
build / Bridge.ccconformation / signals / LengthEvent.hh
build / Bridge.cckinematics / MoveMap.hh
build / Bridge.ccpose / Pose.hh
build / Bridge.ccchemical / ResidueTypeSet.hh
build / Bridge.ccconformation / util.hh
build / BuildInstruction.ccconformation / Conformation.hh
build / BuildInstruction.ccscoring / Energies.hh
build / BuildInstruction.ccconformation / signals / LengthEvent.hh
build / BuildInstruction.ccpose / Pose.hh
build / BuildInstruction.ccchemical / ResidueTypeSet.hh
build / BuildInstruction.hhchemical / ChemicalManager.hh
build / BuildInstruction.hhconformation / signals / LengthEvent.fwd.hh
build / BuildInstruction.hhkinematics / MoveMap.fwd.hh
build / BuildInstruction.hhpose / Pose.fwd.hh
build / BuildInstruction.hhchemical / ResidueTypeSet.fwd.hh
build / BuildInstruction.hhtypes.hh
build / BuildManager.ccpose / annotated_sequence.hh
build / BuildManager.cckinematics / FoldTree.hh
build / BuildManager.cckinematics / MoveMap.hh
build / BuildManager.ccpose / Pose.hh
build / BuildManager.ccconformation / ResidueFactory.hh
build / BuildManager.ccchemical / ResidueType.hh
build / BuildManager.ccchemical / ResidueTypeSet.hh
build / BuildManager.ccid / SequenceMapping.hh
build / BuildManager.ccconformation / util.hh
build / BuildManager.ccpose / variant_util.hh
build / BuildManager.ccchemical / VariantType.hh
build / BuildManager.hhkinematics / MoveMap.fwd.hh
build / BuildManager.hhpose / Pose.fwd.hh
build / BuildManager.hhid / SequenceMapping.fwd.hh
build / BuildManager.hhtypes.hh
methods / chainbreak_eval.ccenergy_methods / ChainbreakEnergy.hh
methods / chainbreak_eval.ccscoring / EnergyMap.hh
methods / chainbreak_eval.cckinematics / FoldTree.hh
methods / chainbreak_eval.ccenergy_methods / LinearChainbreakEnergy.hh
methods / chainbreak_eval.cckinematics / MoveMap.hh
methods / chainbreak_eval.ccpose / Pose.hh
methods / chainbreak_eval.ccscoring / ScoreFunction.hh
methods / chainbreak_eval.ccscoring / ScoreType.hh
methods / chainbreak_eval.hhpose / Pose.fwd.hh
methods / chainbreak_eval.hhtypes.hh
build / ConnectRight.ccid / AtomID.hh
build / ConnectRight.ccconformation / Conformation.hh
build / ConnectRight.cckinematics / FoldTree.hh
build / ConnectRight.ccconformation / signals / LengthEvent.hh
build / ConnectRight.cckinematics / MoveMap.hh
build / ConnectRight.ccpose / PDBInfo.hh
build / ConnectRight.ccpose / util.hh
build / ConnectRight.hhconformation / Conformation.fwd.hh
build / ConnectRight.hhconformation / signals / LengthEvent.fwd.hh
build / ConnectRight.hhid / NamedStubID.hh
build / ConnectRight.hhpose / Pose.hh
build / ConnectRight.hhkinematics / RT.hh
methods / fold_tree_functions.ccconformation / Conformation.hh
methods / fold_tree_functions.cckinematics / Edge.hh
methods / fold_tree_functions.cckinematics / FoldTree.hh
methods / fold_tree_functions.cckinematics / MoveMap.hh
methods / fold_tree_functions.ccpose / Pose.hh
methods / fold_tree_functions.ccconformation / Residue.hh
methods / fold_tree_functions.cctypes.hh
methods / fold_tree_functions.ccpose / variant_util.hh
methods / fold_tree_functions.ccchemical / VariantType.hh
methods / fold_tree_functions.hhkinematics / Edge.hh
methods / fold_tree_functions.hhkinematics / FoldTree.hh
methods / fold_tree_functions.hhkinematics / MoveMap.fwd.hh
methods / fold_tree_functions.hhpose / Pose.fwd.hh
methods / fold_tree_functions.hhtypes.hh
methods / fragment_functions.ccfragment / ConstantLengthFragSet.hh
methods / fragment_functions.ccfragment / FrameIterator.hh
methods / fragment_functions.ccfragment / FrameIteratorWorker_.hh
methods / fragment_functions.hhfragment / ConstantLengthFragSet.fwd.hh
methods / fragment_functions.hhfragment / FrameIterator.fwd.hh
methods / fragment_functions.hhtypes.hh
build / GrowLeft.ccpose / annotated_sequence.hh
build / GrowLeft.ccconformation / Conformation.hh
build / GrowLeft.ccconformation / signals / LengthEvent.hh
build / GrowLeft.cckinematics / MoveMap.hh
build / GrowLeft.ccpose / Pose.hh
build / GrowLeft.ccchemical / ResidueType.hh
build / GrowLeft.hhconformation / signals / LengthEvent.fwd.hh
build / GrowLeft.hhpose / Pose.fwd.hh
build / GrowRight.ccpose / annotated_sequence.hh
build / GrowRight.ccconformation / Conformation.hh
build / GrowRight.ccconformation / signals / LengthEvent.hh
build / GrowRight.cckinematics / MoveMap.hh
build / GrowRight.ccpose / Pose.hh
build / GrowRight.ccchemical / ResidueType.hh
build / GrowRight.hhconformation / signals / LengthEvent.fwd.hh
build / GrowRight.hhpose / Pose.fwd.hh
build / Interval.hhtypes.hh
constraints / InverseRotamersRCG.ccscoring / constraints / AmbiguousConstraint.hh
constraints / InverseRotamersRCG.ccscoring / constraints / BoundConstraint.hh
constraints / InverseRotamersRCG.ccpose / Pose.hh
constraints / InverseRotamersRCG.ccconformation / Residue.hh
constraints / InverseRotamersRCG.ccid / SequenceMapping.hh
constraints / InverseRotamersRCG.hhscoring / func / Func.fwd.hh
constraints / InverseRotamersRCG.hhpose / Pose.fwd.hh
constraints / InverseRotamersRCG.hhconformation / Residue.fwd.hh
constraints / InverseRotamersRCG.hhtypes.hh
constraints / InvrotTreeRCG.ccchemical / ChemicalManager.hh
constraints / InvrotTreeRCG.ccscoring / constraints / Constraint.hh
constraints / InvrotTreeRCG.ccpose / Pose.hh
constraints / InvrotTreeRCG.hhpose / Pose.fwd.hh
constraints / InvrotTreeRCG.hhtypes.hh
constraints / NtoCConstraintGenerator.ccpose / Pose.hh
constraints / NtoCConstraintGenerator.hhpose / Pose.fwd.hh
constraints / NtoCConstraintGenerator.hhtypes.hh
methods / pose_mod.ccconformation / Conformation.hh
methods / pose_mod.ccid / DOF_ID.hh
methods / pose_mod.ccscoring / Energies.hh
methods / pose_mod.cckinematics / FoldTree.hh
methods / pose_mod.ccpack / task / operation / OptCysHG.hh
methods / pose_mod.ccpack / pack_rotamers.hh
methods / pose_mod.ccpack / task / PackerTask.hh
methods / pose_mod.ccscoring / ScoreFunction.hh
methods / pose_mod.ccscoring / ScoreFunctionFactory.hh
methods / pose_mod.ccpack / task / TaskFactory.hh
methods / pose_mod.ccchemical / VariantType.hh
methods / pose_mod.hhid / AtomID.fwd.hh
methods / pose_mod.hhconformation / Conformation.hh
methods / pose_mod.hhpose / Pose.fwd.hh
methods / pose_mod.hhconformation / Residue.hh
methods / pose_mod.hhconformation / ResidueFactory.hh
methods / pose_mod.hhtypes.hh
methods / pose_mod.hhpose / variant_util.hh
build / RelativeConnectRight.ccpose / Pose.hh
build / RelativeSequencePosition.hhtypes.hh
remodel / RemodelAccumulator.ccimport_pose / import_pose.hh
remodel / RemodelAccumulator.ccscoring / constraints / ResidueTypeLinkingConstraint.hh
remodel / RemodelAccumulator.ccscoring / ScoreFunctionFactory.hh
remodel / RemodelAccumulator.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelAccumulator.hhscoring / ScoreFunctionFactory.hh
remodel / RemodelConstraintGenerator.ccscoring / constraints / Constraint.hh
remodel / RemodelConstraintGenerator.ccpose / Pose.hh
remodel / RemodelConstraintGenerator.ccid / SequenceMapping.hh
remodel / RemodelConstraintGenerator.hhscoring / constraints / Constraint.fwd.hh
remodel / RemodelConstraintGenerator.hhpose / Pose.fwd.hh
remodel / RemodelConstraintGenerator.hhid / SequenceMapping.fwd.hh
remodel / RemodelData.ccchemical / ChemicalManager.hh
remodel / RemodelData.ccscoring / dssp / Dssp.hh
remodel / RemodelData.ccimport_pose / import_pose.hh
remodel / RemodelData.ccpose / PDBInfo.hh
remodel / RemodelData.ccpack / task / ResfileReader.hh
remodel / RemodelData.ccchemical / ResidueType.hh
remodel / RemodelData.ccchemical / ResidueTypeSet.hh
remodel / RemodelData.hhchemical / AA.hh
remodel / RemodelData.hhkinematics / MoveMap.hh
remodel / RemodelData.hhpose / Pose.hh
remodel / RemodelDesignMover.ccpose / metrics / CalculatorFactory.hh
remodel / RemodelDesignMover.ccchemical / ChemicalManager.hh
remodel / RemodelDesignMover.ccscoring / constraints / ConstraintSet.hh
remodel / RemodelDesignMover.ccutil / disulfide_util.hh
remodel / RemodelDesignMover.ccscoring / disulfides / DisulfideMatchingPotential.hh
remodel / RemodelDesignMover.cckinematics / MoveMap.hh
remodel / RemodelDesignMover.ccpack / pack_rotamers.hh
remodel / RemodelDesignMover.ccpose / PDBInfo.hh
remodel / RemodelDesignMover.ccpack / task / ResfileReader.hh
remodel / RemodelDesignMover.ccconformation / Residue.hh
remodel / RemodelDesignMover.ccpack / rotamer_set / RotamerLinks.hh
remodel / RemodelDesignMover.ccscoring / ScoreFunction.hh
remodel / RemodelDesignMover.ccpack / task / TaskFactory.hh
remodel / RemodelDesignMover.cctypes.hh
remodel / RemodelDesignMover.ccpose / symmetry / util.hh
remodel / RemodelDesignMover.ccconformation / util.hh
remodel / RemodelDesignMover.hhkinematics / MoveMap.hh
remodel / RemodelDesignMover.hhpose / Pose.fwd.hh
remodel / RemodelDesignMover.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelEnzdesCstModule.ccchemical / ChemicalManager.hh
remodel / RemodelEnzdesCstModule.ccscoring / constraints / Constraint.fwd.hh
remodel / RemodelEnzdesCstModule.ccchemical / ResidueType.hh
remodel / RemodelEnzdesCstModule.ccchemical / ResidueTypeSet.hh
remodel / RemodelEnzdesCstModule.ccscoring / ScoreFunction.hh
remodel / RemodelEnzdesCstModule.ccscoring / ScoreFunctionFactory.hh
remodel / RemodelEnzdesCstModule.hhpose / Pose.fwd.hh
remodel / RemodelEnzdesCstModule.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelGlobalFrame.ccid / AtomID.hh
remodel / RemodelGlobalFrame.ccpose / metrics / CalculatorFactory.hh
remodel / RemodelGlobalFrame.ccchemical / ChemicalManager.hh
remodel / RemodelGlobalFrame.ccscoring / constraints / ConstraintSet.hh
remodel / RemodelGlobalFrame.ccutil / disulfide_util.hh
remodel / RemodelGlobalFrame.ccscoring / disulfides / DisulfideMatchingPotential.hh
remodel / RemodelGlobalFrame.cckinematics / MoveMap.hh
remodel / RemodelGlobalFrame.ccpack / pack_rotamers.hh
remodel / RemodelGlobalFrame.ccpose / PDBInfo.hh
remodel / RemodelGlobalFrame.ccio / Remarks.hh
remodel / RemodelGlobalFrame.ccpack / task / ResfileReader.hh
remodel / RemodelGlobalFrame.ccconformation / Residue.hh
remodel / RemodelGlobalFrame.ccchemical / ResidueTypeSet.hh
remodel / RemodelGlobalFrame.ccpack / rotamer_set / RotamerLinks.hh
remodel / RemodelGlobalFrame.ccscoring / ScoreFunction.hh
remodel / RemodelGlobalFrame.ccio / StructFileRep.hh
remodel / RemodelGlobalFrame.ccpack / task / TaskFactory.hh
remodel / RemodelGlobalFrame.ccio / util.hh
remodel / RemodelGlobalFrame.ccpose / util.hh
remodel / RemodelGlobalFrame.ccpose / symmetry / util.hh
remodel / RemodelGlobalFrame.ccconformation / util.hh
remodel / RemodelGlobalFrame.hhscoring / constraints / ConstraintSet.fwd.hh
remodel / RemodelGlobalFrame.hhkinematics / MoveMap.hh
remodel / RemodelGlobalFrame.hhpose / Pose.fwd.hh
remodel / RemodelGlobalFrame.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelLigandHandler.ccid / AtomID.hh
remodel / RemodelLigandHandler.ccpose / metrics / CalculatorFactory.hh
remodel / RemodelLigandHandler.ccchemical / ChemicalManager.hh
remodel / RemodelLigandHandler.ccscoring / constraints / ConstraintSet.hh
remodel / RemodelLigandHandler.ccutil / disulfide_util.hh
remodel / RemodelLigandHandler.ccscoring / disulfides / DisulfideMatchingPotential.hh
remodel / RemodelLigandHandler.cckinematics / FoldTree.hh
remodel / RemodelLigandHandler.cckinematics / MoveMap.hh
remodel / RemodelLigandHandler.ccpack / pack_rotamers.hh
remodel / RemodelLigandHandler.ccpose / PDBInfo.hh
remodel / RemodelLigandHandler.ccio / Remarks.hh
remodel / RemodelLigandHandler.ccpack / task / ResfileReader.hh
remodel / RemodelLigandHandler.ccconformation / Residue.hh
remodel / RemodelLigandHandler.ccchemical / ResidueTypeSet.hh
remodel / RemodelLigandHandler.ccpack / rotamer_set / RotamerLinks.hh
remodel / RemodelLigandHandler.ccscoring / ScoreFunction.hh
remodel / RemodelLigandHandler.ccscoring / ScoreFunctionFactory.hh
remodel / RemodelLigandHandler.ccpack / task / TaskFactory.hh
remodel / RemodelLigandHandler.ccpose / util.hh
remodel / RemodelLigandHandler.ccpose / symmetry / util.hh
remodel / RemodelLigandHandler.ccconformation / util.hh
remodel / RemodelLigandHandler.hhscoring / constraints / ConstraintSet.fwd.hh
remodel / RemodelLigandHandler.hhkinematics / MoveMap.hh
remodel / RemodelLigandHandler.hhpose / Pose.fwd.hh
remodel / RemodelLigandHandler.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelLoopMover.ccsequence / ABEGOManager.hh
remodel / RemodelLoopMover.ccchemical / AtomType.hh
remodel / RemodelLoopMover.ccpose / datacache / CacheableDataType.hh
remodel / RemodelLoopMover.ccchemical / ChemicalManager.hh
remodel / RemodelLoopMover.ccconformation / Conformation.hh
remodel / RemodelLoopMover.ccfragment / ConstantLengthFragSet.fwd.hh
remodel / RemodelLoopMover.ccfragment / ConstantLengthFragSet.hh
remodel / RemodelLoopMover.ccscoring / constraints / ConstraintSet.hh
remodel / RemodelLoopMover.ccscoring / dssp / Dssp.hh
remodel / RemodelLoopMover.ccscoring / Energies.hh
remodel / RemodelLoopMover.cckinematics / FoldTree.hh
remodel / RemodelLoopMover.ccfragment / FragData.hh
remodel / RemodelLoopMover.ccfragment / FragSet.hh
remodel / RemodelLoopMover.ccfragment / Frame.fwd.hh
remodel / RemodelLoopMover.ccfragment / Frame.hh
remodel / RemodelLoopMover.ccfragment / FrameIterator.hh
remodel / RemodelLoopMover.ccimport_pose / import_pose.hh
remodel / RemodelLoopMover.ccpose / PDBInfo.hh
remodel / RemodelLoopMover.ccpose / Pose.hh
remodel / RemodelLoopMover.ccconformation / Residue.hh
remodel / RemodelLoopMover.ccconformation / ResidueFactory.hh
remodel / RemodelLoopMover.ccchemical / ResidueType.hh
remodel / RemodelLoopMover.ccchemical / ResidueTypeFinder.hh
remodel / RemodelLoopMover.ccscoring / constraints / ResidueTypeLinkingConstraint.hh
remodel / RemodelLoopMover.ccchemical / ResidueTypeSet.hh
remodel / RemodelLoopMover.ccscoring / ScoreFunction.hh
remodel / RemodelLoopMover.ccscoring / ScoreFunctionFactory.hh
remodel / RemodelLoopMover.ccscoring / ScoreType.hh
remodel / RemodelLoopMover.ccscoring / ScoringManager.hh
remodel / RemodelLoopMover.ccutil / SwitchResidueTypeSet.hh
remodel / RemodelLoopMover.ccconformation / symmetry / SymmetricConformation.hh
remodel / RemodelLoopMover.ccconformation / symmetry / SymmetryInfo.fwd.hh
remodel / RemodelLoopMover.ccconformation / symmetry / SymmetryInfo.hh
remodel / RemodelLoopMover.ccid / TorsionID.hh
remodel / RemodelLoopMover.ccio / util.hh
remodel / RemodelLoopMover.ccchemical / util.hh
remodel / RemodelLoopMover.ccpose / symmetry / util.hh
remodel / RemodelLoopMover.ccpose / variant_util.hh
remodel / RemodelLoopMover.ccchemical / VariantType.hh
remodel / RemodelLoopMover.hhfragment / FragSet.fwd.hh
remodel / RemodelLoopMover.hhkinematics / MoveMap.hh
remodel / RemodelLoopMover.hhpose / Pose.fwd.hh
remodel / RemodelLoopMover.hhpose / Pose.hh
remodel / RemodelLoopMover.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelMover.ccchemical / AA.hh
remodel / RemodelMover.ccpose / annotated_sequence.hh
remodel / RemodelMover.ccpose / datacache / CacheableDataType.hh
remodel / RemodelMover.ccpose / datacache / CacheableObserverType.hh
remodel / RemodelMover.ccpose / metrics / CalculatorFactory.hh
remodel / RemodelMover.ccpose / chains_util.hh
remodel / RemodelMover.ccchemical / ChemicalManager.hh
remodel / RemodelMover.ccscoring / constraints / ConstraintSet.hh
remodel / RemodelMover.ccscoring / dssp / Dssp.hh
remodel / RemodelMover.ccscoring / Energies.hh
remodel / RemodelMover.ccpose / extra_pose_info_util.hh
remodel / RemodelMover.cckinematics / FoldTree.hh
remodel / RemodelMover.cckinematics / MoveMap.hh
remodel / RemodelMover.ccpack / task / operation / NoRepackDisulfides.hh
remodel / RemodelMover.ccpose / datacache / ObserverCache.hh
remodel / RemodelMover.ccpack / task / operation / OperateOnCertainResidues.hh
remodel / RemodelMover.ccpack / task / PackerTask.hh
remodel / RemodelMover.ccpose / PDBInfo.hh
remodel / RemodelMover.ccpose / Pose.hh
remodel / RemodelMover.ccio / Remarks.hh
remodel / RemodelMover.ccconformation / Residue.hh
remodel / RemodelMover.ccchemical / ResidueTypeSet.hh
remodel / RemodelMover.ccpack / task / operation / ResLvlTaskOperations.hh
remodel / RemodelMover.ccscoring / rms_util.hh
remodel / RemodelMover.ccscoring / ScoreFunctionFactory.hh
remodel / RemodelMover.ccutil / SwitchResidueTypeSet.hh
remodel / RemodelMover.ccconformation / symmetry / SymmetryInfo.hh
remodel / RemodelMover.ccpack / task / TaskFactory.hh
remodel / RemodelMover.ccpack / task / operation / TaskOperations.hh
remodel / RemodelMover.ccconformation / symmetry / util.hh
remodel / RemodelMover.ccpose / symmetry / util.hh
remodel / RemodelMover.ccpose / variant_util.hh
remodel / RemodelMover.hhpose / Pose.fwd.hh
remodel / RemodelMover.hhscoring / ScoreFunction.fwd.hh
remodel / RemodelMover.hhpack / task / TaskFactory.fwd.hh
remodel / RemodelMover.hhtypes.hh
remodel / RemodelRotamerLinks.ccpack / task / PackerTask.hh
remodel / RemodelRotamerLinks.ccpose / PDBInfo.hh
remodel / RemodelRotamerLinks.ccpose / Pose.hh
remodel / RemodelRotamerLinks.ccchemical / ResidueType.hh
remodel / RemodelRotamerLinks.ccpack / rotamer_set / RotamerLinks.hh
remodel / RemodelRotamerLinks.ccconformation / symmetry / SymmetryInfo.hh
remodel / RemodelRotamerLinks.ccpack / task / operation / task_op_schemas.hh
remodel / RemodelRotamerLinks.ccpose / symmetry / util.hh
remodel / RemodelRotamerLinks.hhpack / task / operation / TaskOperation.hh
remodel / RemodelRotamerLinksCreator.hhpack / task / operation / TaskOperationCreator.hh
remodel / RemodelWorkingSet.ccpose / annotated_sequence.hh
remodel / RemodelWorkingSet.ccchemical / ChemicalManager.hh
remodel / RemodelWorkingSet.ccfragment / ConstantLengthFragSet.fwd.hh
remodel / RemodelWorkingSet.cckinematics / FoldTree.hh
remodel / RemodelWorkingSet.ccfragment / Frame.fwd.hh
remodel / RemodelWorkingSet.cckinematics / Jump.hh
remodel / RemodelWorkingSet.ccfragment / OrderedFragSet.fwd.hh
remodel / RemodelWorkingSet.ccpose / Pose.hh
remodel / RemodelWorkingSet.ccpack / task / ResfileReader.hh
remodel / RemodelWorkingSet.ccconformation / Residue.hh
remodel / RemodelWorkingSet.ccchemical / ResidueType.hh
remodel / RemodelWorkingSet.ccchemical / ResidueTypeSet.hh
remodel / RemodelWorkingSet.ccpack / task / TaskFactory.hh
remodel / RemodelWorkingSet.ccpose / util.hh
remodel / RemodelWorkingSet.hhpack / task / PackerTask.hh
remodel / RemodelWorkingSet.hhpose / Pose.hh
constraints / RemoveRemodelCsts.ccscoring / constraints / Constraint.hh
constraints / RemoveRemodelCsts.ccscoring / constraints / ConstraintSet.hh
constraints / RemoveRemodelCsts.ccpose / Pose.hh
constraints / RemoveRemodelCsts.hhpose / Pose.fwd.hh
constraints / RemoveRemodelCsts.hhtypes.hh
remodel / ResidueVicinityRCG.ccscoring / constraints / AmbiguousConstraint.hh
remodel / ResidueVicinityRCG.ccscoring / constraints / AngleConstraint.hh
remodel / ResidueVicinityRCG.ccid / AtomID.hh
remodel / ResidueVicinityRCG.ccscoring / constraints / AtomPairConstraint.hh
remodel / ResidueVicinityRCG.ccscoring / constraints / DihedralConstraint.hh
remodel / ResidueVicinityRCG.ccpose / Pose.hh
remodel / ResidueVicinityRCG.ccid / SequenceMapping.hh
remodel / ResidueVicinityRCG.hhscoring / constraints / Constraint.fwd.hh
remodel / ResidueVicinityRCG.hhscoring / func / Func.fwd.hh
remodel / ResidueVicinityRCG.hhpose / Pose.fwd.hh
remodel / ResidueVicinityRCG.hhtypes.hh
build / SegmentInsert.ccpose / annotated_sequence.hh
build / SegmentInsert.ccid / AtomID.hh
build / SegmentInsert.ccconformation / Conformation.hh
build / SegmentInsert.cckinematics / constants.hh
build / SegmentInsert.ccconformation / signals / LengthEvent.hh
build / SegmentInsert.cckinematics / MoveMap.hh
build / SegmentInsert.ccpose / PDBInfo.hh
build / SegmentInsert.ccconformation / Residue.hh
build / SegmentInsert.ccid / TorsionID.hh
build / SegmentInsert.ccid / types.hh
build / SegmentInsert.ccpose / util.hh
build / SegmentInsert.ccconformation / util.hh
build / SegmentInsert.hhkinematics / MoveMap.hh
build / SegmentInsert.hhpose / Pose.hh
build / SegmentRebuild.ccpose / annotated_sequence.hh
build / SegmentRebuild.ccconformation / Conformation.hh
build / SegmentRebuild.cckinematics / constants.hh
build / SegmentRebuild.cckinematics / FoldTree.hh
build / SegmentRebuild.ccconformation / signals / LengthEvent.hh
build / SegmentRebuild.cckinematics / MoveMap.hh
build / SegmentRebuild.ccpose / PDBInfo.hh
build / SegmentRebuild.ccpose / Pose.hh
build / SegmentRebuild.ccconformation / ResidueFactory.hh
build / SegmentRebuild.ccchemical / ResidueType.hh
build / SegmentRebuild.ccid / TorsionID.hh
build / SegmentRebuild.ccconformation / util.hh
build / SegmentRebuild.hhconformation / signals / LengthEvent.fwd.hh
build / SegmentRebuild.hhpose / Pose.fwd.hh
build / SegmentSwap.ccconformation / Conformation.hh
build / SegmentSwap.cckinematics / FoldTree.hh
build / SegmentSwap.ccconformation / signals / LengthEvent.hh
build / SegmentSwap.ccpose / PDBInfo.hh
build / SegmentSwap.ccconformation / util.hh
build / SegmentSwap.ccpose / util.hh
build / SegmentSwap.hhconformation / signals / LengthEvent.fwd.hh
build / SegmentSwap.hhkinematics / MoveMap.hh
build / SegmentSwap.hhpose / Pose.hh
methods / util.ccchemical / AA.hh
methods / util.ccscoring / constraints / AtomPairConstraint.hh
methods / util.ccconformation / Conformation.hh
methods / util.ccscoring / constraints / ConstraintSet.hh
methods / util.ccscoring / constraints / CoordinateConstraint.hh
methods / util.cckinematics / FoldTree.hh
methods / util.ccscoring / func / HarmonicFunc.hh
methods / util.cckinematics / MoveMap.hh
methods / util.ccpack / task / operation / NoRepackDisulfides.hh
methods / util.ccpack / task / PackerTask.hh
methods / util.ccpose / PDBInfo.hh
methods / util.ccpose / PDBPoseMap.hh
methods / util.ccpose / Pose.hh
methods / util.ccpack / task / ResfileReader.hh
methods / util.ccconformation / Residue.hh
methods / util.ccscoring / sasa.hh
methods / util.ccconformation / symmetry / SymmetryInfo.hh
methods / util.ccpack / task / TaskFactory.hh
methods / util.ccpack / task / operation / TaskOperations.hh
methods / util.cctypes.hh
methods / util.ccid / types.hh
methods / util.ccpose / util.hh
methods / util.ccconformation / symmetry / util.hh
methods / util.ccpose / symmetry / util.hh
methods / util.ccchemical / VariantType.hh
methods / util.hhkinematics / FoldTree.fwd.hh
methods / util.hhpack / task / PackerTask.fwd.hh
methods / util.hhpose / Pose.fwd.hh
methods / util.hhpack / task / TaskFactory.fwd.hh
methods / util.hhtypes.hh
components / VarLengthBuild.ccpose / datacache / CacheableObserverType.hh
components / VarLengthBuild.ccchemical / ChemicalManager.hh
components / VarLengthBuild.ccfragment / ConstantLengthFragSet.hh
components / VarLengthBuild.ccscoring / Energies.hh
components / VarLengthBuild.ccfragment / picking_old / FragmentLibraryManager.hh
components / VarLengthBuild.ccfragment / Frame.hh
components / VarLengthBuild.ccfragment / FrameIterator.hh
components / VarLengthBuild.ccfragment / FrameIteratorWorker_.hh
components / VarLengthBuild.ccfragment / IndependentBBTorsionSRFD.hh
components / VarLengthBuild.cckinematics / MoveMap.hh
components / VarLengthBuild.ccpose / datacache / ObserverCache.hh
components / VarLengthBuild.ccfragment / OrderedFragSet.hh
components / VarLengthBuild.ccpose / PDBInfo.hh
components / VarLengthBuild.ccpose / Pose.hh
components / VarLengthBuild.ccchemical / ResidueType.hh
components / VarLengthBuild.ccchemical / ResidueTypeFinder.hh
components / VarLengthBuild.ccchemical / ResidueTypeSet.hh
components / VarLengthBuild.ccscoring / ScoreFunction.hh
components / VarLengthBuild.ccscoring / ScoreFunctionFactory.hh
components / VarLengthBuild.ccid / SequenceMapping.hh
components / VarLengthBuild.ccutil / SwitchResidueTypeSet.hh
components / VarLengthBuild.ccfragment / picking_old / vall / util.hh
components / VarLengthBuild.ccpose / symmetry / util.hh
components / VarLengthBuild.ccchemical / VariantType.hh
components / VarLengthBuild.hhfragment / ConstantLengthFragSet.fwd.hh
components / VarLengthBuild.hhfragment / FrameList.fwd.hh
components / VarLengthBuild.hhkinematics / MoveMap.fwd.hh
components / VarLengthBuild.hhfragment / OrderedFragSet.fwd.hh
components / VarLengthBuild.hhpose / Pose.fwd.hh
components / VarLengthBuild.hhscoring / ScoreFunction.fwd.hh