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protein → core Relation

File in src/protocols/stepwise/modeler/proteinIncludes file in src/core
InputStreamWithResidueInfo.ccimport_pose / pose_stream / ExtendedPoseInputStream.hh
InputStreamWithResidueInfo.ccimport_pose / pose_stream / PDBPoseInputStream.hh
InputStreamWithResidueInfo.ccpose / Pose.hh
InputStreamWithResidueInfo.ccimport_pose / pose_stream / PoseInputStream.fwd.hh
InputStreamWithResidueInfo.ccchemical / ResidueType.hh
InputStreamWithResidueInfo.ccscoring / rms_util.hh
InputStreamWithResidueInfo.ccimport_pose / pose_stream / SilentFilePoseInputStream.hh
InputStreamWithResidueInfo.cctypes.hh
InputStreamWithResidueInfo.ccpose / copydofs / util.hh
InputStreamWithResidueInfo.ccpose / rna / util.hh
InputStreamWithResidueInfo.ccpose / variant_util.hh
InputStreamWithResidueInfo.hhpose / Pose.fwd.hh
InputStreamWithResidueInfo.hhimport_pose / pose_stream / PoseInputStream.fwd.hh
InputStreamWithResidueInfo.hhchemical / ResidueTypeSet.fwd.hh
InputStreamWithResidueInfo.hhtypes.hh
MainChainTorsionSet.ccio / silent / BinarySilentStruct.hh
MainChainTorsionSet.cctypes.hh
MainChainTorsionSet.hhtypes.hh
checker / ProteinAtrRepChecker.ccscoring / Energies.hh
checker / ProteinAtrRepChecker.ccscoring / methods / EnergyMethodOptions.hh
checker / ProteinAtrRepChecker.ccscoring / etable / Etable.hh
checker / ProteinAtrRepChecker.ccscoring / etable / EtableEnergy.hh
checker / ProteinAtrRepChecker.ccpose / Pose.hh
checker / ProteinAtrRepChecker.ccscoring / ScoreFunction.hh
checker / ProteinAtrRepChecker.ccscoring / ScoringManager.hh
checker / ProteinAtrRepChecker.ccpose / util.hh
checker / ProteinAtrRepChecker.hhpose / Pose.hh
checker / ProteinAtrRepChecker.hhscoring / ScoreFunction.fwd.hh
StepWiseProteinBackboneSampler.ccpose / annotated_sequence.hh
StepWiseProteinBackboneSampler.ccid / AtomID.hh
StepWiseProteinBackboneSampler.ccchemical / ChemicalManager.hh
StepWiseProteinBackboneSampler.ccscoring / dssp / Dssp.hh
StepWiseProteinBackboneSampler.ccscoring / Energies.hh
StepWiseProteinBackboneSampler.cckinematics / Jump.hh
StepWiseProteinBackboneSampler.ccpose / Pose.hh
StepWiseProteinBackboneSampler.ccio / silent / ProteinSilentStruct.hh
StepWiseProteinBackboneSampler.ccscoring / Ramachandran.hh
StepWiseProteinBackboneSampler.ccscoring / RamaPrePro.hh
StepWiseProteinBackboneSampler.ccscoring / rms_util.tmpl.hh
StepWiseProteinBackboneSampler.ccscoring / ScoreFunction.hh
StepWiseProteinBackboneSampler.ccscoring / ScoreFunctionFactory.hh
StepWiseProteinBackboneSampler.ccscoring / ScoreType.hh
StepWiseProteinBackboneSampler.ccscoring / ScoringManager.hh
StepWiseProteinBackboneSampler.ccio / silent / SilentFileData.fwd.hh
StepWiseProteinBackboneSampler.ccio / silent / SilentFileData.hh
StepWiseProteinBackboneSampler.ccutil / SwitchResidueTypeSet.hh
StepWiseProteinBackboneSampler.ccid / TorsionID.hh
StepWiseProteinBackboneSampler.cctypes.hh
StepWiseProteinBackboneSampler.ccpose / rna / util.hh
StepWiseProteinBackboneSampler.ccpose / full_model_info / util.hh
StepWiseProteinBackboneSampler.ccpose / variant_util.hh
StepWiseProteinBackboneSampler.hhkinematics / FoldTree.fwd.hh
StepWiseProteinBackboneSampler.hhpose / Pose.fwd.hh
StepWiseProteinBackboneSampler.hhscoring / Ramachandran.fwd.hh
StepWiseProteinBackboneSampler.hhscoring / RamaPrePro.fwd.hh
StepWiseProteinBackboneSampler.hhscoring / ScoreFunction.fwd.hh
StepWiseProteinBackboneSampler.hhid / TorsionID.fwd.hh
StepWiseProteinBackboneSampler.hhtypes.hh
loop_close / StepWiseProteinCCD_Closer.ccid / AtomID.hh
loop_close / StepWiseProteinCCD_Closer.cckinematics / Jump.hh
loop_close / StepWiseProteinCCD_Closer.ccpose / Pose.hh
loop_close / StepWiseProteinCCD_Closer.ccconformation / Residue.hh
loop_close / StepWiseProteinCCD_Closer.ccchemical / ResidueType.hh
loop_close / StepWiseProteinCCD_Closer.ccid / TorsionID.hh
loop_close / StepWiseProteinCCD_Closer.cctypes.hh
loop_close / StepWiseProteinCCD_Closer.ccchemical / VariantType.hh
loop_close / StepWiseProteinCCD_Closer.hhkinematics / MoveMap.hh
loop_close / StepWiseProteinCCD_Closer.hhpose / Pose.fwd.hh
loop_close / StepWiseProteinCCD_Closer.hhid / TorsionID.hh
loop_close / StepWiseProteinCCD_MultiPoseCloser.ccpose / Pose.hh
loop_close / StepWiseProteinCCD_MultiPoseCloser.hhpose / Pose.fwd.hh
loop_close / StepWiseProteinCCD_MultiPoseCloser.hhid / TorsionID.fwd.hh
loop_close / StepWiseProteinKIC_LoopBridger.cckinematics / FoldTree.hh
loop_close / StepWiseProteinKIC_LoopBridger.cckinematics / Jump.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccpose / Pose.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccscoring / Ramachandran.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccconformation / Residue.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccchemical / ResidueConnection.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccio / silent / SilentFileData.fwd.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccid / TorsionID.hh
loop_close / StepWiseProteinKIC_LoopBridger.cctypes.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccpose / rna / util.hh
loop_close / StepWiseProteinKIC_LoopBridger.ccchemical / VariantType.hh
loop_close / StepWiseProteinKIC_LoopBridger.hhpose / Pose.fwd.hh
loop_close / StepWiseProteinKIC_LoopBridger.hhscoring / Ramachandran.hh
loop_close / StepWiseProteinKIC_LoopBridger.hhid / TorsionID.fwd.hh
util.ccid / AtomID.hh
util.ccid / AtomID_Map.hh
util.ccfragment / ConstantLengthFragSet.hh
util.ccfragment / FragData.hh
util.ccfragment / FragSet.hh
util.ccfragment / Frame.hh
util.ccfragment / FrameList.hh
util.ccpose / full_model_info / FullModelInfo.hh
util.ccid / NamedAtomID.hh
util.ccpose / Pose.hh
loop_close / util.ccpose / Pose.hh
util.ccscoring / rms_util.hh
loop_close / util.ccid / TorsionID.hh
util.cctypes.hh
util.ccpose / util.hh
util.ccpose / full_model_info / util.hh
util.hhid / AtomID.fwd.hh
util.hhid / AtomID_Map.fwd.hh
util.hhpose / Pose.fwd.hh
loop_close / util.hhpose / Pose.fwd.hh
util.hhio / silent / SilentFileData.hh
util.hhtypes.hh