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toolbox → core Relation

File in src/protocols/toolboxIncludes file in src/core
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccscoring / methods / ContextDependentLRTwoBodyEnergy.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccscoring / methods / ContextIndependentLRTwoBodyEnergy.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccscoring / Energies.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccpack / task / PackerTask.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccio / pdb / pdb_writer.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccpose / PDBInfo.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccconformation / Residue.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccpack / rotamer_set / RotamerSet.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccpack / rotamer_set / RotamerSetFactory.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccscoring / ScoreFunction.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.ccpose / util.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.hhpack / task / PackerTask.fwd.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.hhpose / Pose.fwd.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.hhconformation / Residue.fwd.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.hhpack / rotamer_set / RotamerSet.fwd.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.hhpack / rotamer_set / RotamerSetOperation.hh
rotamer_set_operations / AddGood2BPairEnergyRotamers.hhscoring / ScoreFunction.fwd.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccid / AtomID.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccid / AtomID_Map.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.cckinematics / FoldTree.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccpose / Pose.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccconformation / Residue.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccchemical / ResidueTypeSet.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccscoring / rms_util.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccutil / SwitchResidueTypeSet.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.cctypes.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.ccpose / util.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.hhchemical / ChemicalManager.fwd.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.hhpose / Pose.fwd.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.hhconformation / Residue.fwd.hh
match_enzdes_util / AlignPoseToInvrotTreeMover.hhtypes.hh
match_enzdes_util / AllowedSeqposForGeomCst.ccpose / Pose.hh
match_enzdes_util / AllowedSeqposForGeomCst.ccconformation / Residue.hh
match_enzdes_util / AllowedSeqposForGeomCst.cctypes.hh
match_enzdes_util / AllowedSeqposForGeomCst.hhpose / Pose.fwd.hh
match_enzdes_util / AllowedSeqposForGeomCst.hhtypes.hh
CalcInterNeighborGroup.ccconformation / find_neighbors.hh
CalcInterNeighborGroup.ccconformation / PointGraph.hh
CalcInterNeighborGroup.ccconformation / PointGraphData.hh
CalcInterNeighborGroup.ccpose / Pose.hh
CalcInterNeighborGroup.hhpose / Pose.fwd.hh
CalcInterNeighborGroup.hhpose / metrics / PoseMetricCalculatorBase.hh
CalcInterNeighborGroup.hhtypes.hh
Cluster.hhtypes.hh
Cluster.impl.hhio / silent / SilentStruct.hh
Cluster.impl.hhtypes.hh
DecoySetEvaluation.ccscoring / constraints / BoundConstraint.hh
DecoySetEvaluation.ccscoring / constraints / ConstraintSet.hh
DecoySetEvaluation.ccscoring / constraints / LocalCoordinateConstraint.hh
DecoySetEvaluation.ccscoring / constraints / NamedAtomPairConstraint.hh
DecoySetEvaluation.ccid / NamedStubID.hh
DecoySetEvaluation.ccpose / Pose.hh
DecoySetEvaluation.ccconformation / Residue.hh
DecoySetEvaluation.ccio / silent / SilentFileData.hh
DecoySetEvaluation.cctypes.hh
DecoySetEvaluation.ccpose / util.hh
DecoySetEvaluation.hhscoring / constraints / ConstraintSet.fwd.hh
DecoySetEvaluation.hhpose / Pose.hh
DecoySetEvaluation.hhio / silent / SilentFileData.fwd.hh
DecoySetEvaluation.hhtypes.hh
DecoySetEvaluation.impl.hhpose / Pose.hh
DecoySetEvaluation.impl.hhconformation / Residue.hh
DecoySetEvaluation.impl.hhtypes.hh
EnergyLandscapeEvaluator.hhtypes.hh
match_enzdes_util / EnzConstraintIO.ccchemical / ChemicalManager.hh
match_enzdes_util / EnzConstraintIO.ccscoring / constraints / Constraint.hh
match_enzdes_util / EnzConstraintIO.ccscoring / constraints / Constraints.hh
match_enzdes_util / EnzConstraintIO.ccscoring / constraints / ConstraintSet.hh
match_enzdes_util / EnzConstraintIO.ccpose / PDBInfo.hh
match_enzdes_util / EnzConstraintIO.ccpose / PDBPoseMap.hh
match_enzdes_util / EnzConstraintIO.ccpose / Pose.hh
match_enzdes_util / EnzConstraintIO.ccconformation / Residue.hh
match_enzdes_util / EnzConstraintIO.ccscoring / ScoreFunction.hh
match_enzdes_util / EnzConstraintIO.hhpose / Pose.fwd.hh
match_enzdes_util / EnzConstraintIO.hhchemical / ResidueTypeSet.fwd.hh
match_enzdes_util / EnzConstraintIO.hhscoring / ScoreFunction.fwd.hh
match_enzdes_util / EnzConstraintIO.hhid / SequenceMapping.fwd.hh
match_enzdes_util / EnzConstraintIO.hhtypes.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / AmbiguousConstraint.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / AngleConstraint.hh
match_enzdes_util / EnzConstraintParameters.ccid / AtomID.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / AtomPairConstraint.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / BoundConstraint.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / func / CharmmPeriodicFunc.hh
match_enzdes_util / EnzConstraintParameters.ccchemical / ChemicalManager.hh
match_enzdes_util / EnzConstraintParameters.ccconformation / Conformation.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / Constraint.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / Constraints.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / ConstraintSet.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / DihedralConstraint.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / Energies.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / func / Func.hh
match_enzdes_util / EnzConstraintParameters.ccchemical / GlobalResidueTypeSet.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / constraints / MultiConstraint.hh
match_enzdes_util / EnzConstraintParameters.ccchemical / Patch.hh
match_enzdes_util / EnzConstraintParameters.ccpose / PDBInfo.hh
match_enzdes_util / EnzConstraintParameters.ccpose / Pose.hh
match_enzdes_util / EnzConstraintParameters.ccio / Remarks.hh
match_enzdes_util / EnzConstraintParameters.ccchemical / ResidueProperties.hh
match_enzdes_util / EnzConstraintParameters.ccchemical / ResidueTypeFinder.hh
match_enzdes_util / EnzConstraintParameters.ccchemical / ResidueTypeSet.hh
match_enzdes_util / EnzConstraintParameters.ccscoring / ScoreFunction.hh
match_enzdes_util / EnzConstraintParameters.ccid / SequenceMapping.hh
match_enzdes_util / EnzConstraintParameters.ccpack / rotamers / SingleLigandRotamerLibrary.hh
match_enzdes_util / EnzConstraintParameters.cctypes.hh
match_enzdes_util / EnzConstraintParameters.ccpose / variant_util.hh
match_enzdes_util / EnzConstraintParameters.hhscoring / constraints / Constraint.fwd.hh
match_enzdes_util / EnzConstraintParameters.hhscoring / func / Func.fwd.hh
match_enzdes_util / EnzConstraintParameters.hhpose / Pose.fwd.hh
match_enzdes_util / EnzConstraintParameters.hhchemical / ResidueTypeSet.fwd.hh
match_enzdes_util / EnzConstraintParameters.hhscoring / ScoreFunction.fwd.hh
match_enzdes_util / EnzConstraintParameters.hhid / SequenceMapping.fwd.hh
match_enzdes_util / EnzConstraintParameters.hhtypes.hh
match_enzdes_util / EnzCstTemplateRes.ccchemical / AA.hh
match_enzdes_util / EnzCstTemplateRes.ccid / AtomID.hh
match_enzdes_util / EnzCstTemplateRes.ccchemical / AtomType.hh
match_enzdes_util / EnzCstTemplateRes.ccpose / Pose.hh
match_enzdes_util / EnzCstTemplateRes.ccconformation / Residue.hh
match_enzdes_util / EnzCstTemplateRes.ccchemical / ResidueTypeSet.hh
match_enzdes_util / EnzCstTemplateRes.ccid / SequenceMapping.hh
match_enzdes_util / EnzCstTemplateRes.hhid / AtomID.fwd.hh
match_enzdes_util / EnzCstTemplateRes.hhpose / Pose.fwd.hh
match_enzdes_util / EnzCstTemplateRes.hhconformation / Residue.fwd.hh
match_enzdes_util / EnzCstTemplateRes.hhchemical / ResidueType.fwd.hh
match_enzdes_util / EnzCstTemplateRes.hhchemical / ResidueTypeSet.fwd.hh
match_enzdes_util / EnzCstTemplateRes.hhid / SequenceMapping.fwd.hh
match_enzdes_util / EnzdesCacheableObserver.ccpose / datacache / CacheableObserverType.hh
match_enzdes_util / EnzdesCacheableObserver.ccconformation / Conformation.hh
match_enzdes_util / EnzdesCacheableObserver.ccconformation / signals / LengthEvent.hh
match_enzdes_util / EnzdesCacheableObserver.ccpose / datacache / ObserverCache.hh
match_enzdes_util / EnzdesCacheableObserver.ccpack / task / PackerTask.hh
match_enzdes_util / EnzdesCacheableObserver.ccpose / Pose.hh
match_enzdes_util / EnzdesCacheableObserver.ccconformation / Residue.hh
match_enzdes_util / EnzdesCacheableObserver.ccscoring / constraints / ResidueTypeConstraint.hh
match_enzdes_util / EnzdesCacheableObserver.ccid / SequenceMapping.hh
match_enzdes_util / EnzdesCacheableObserver.ccsequence / SequenceProfile.hh
match_enzdes_util / EnzdesCacheableObserver.ccscoring / constraints / SequenceProfileConstraint.hh
match_enzdes_util / EnzdesCacheableObserver.hhpose / datacache / CacheableObserver.hh
match_enzdes_util / EnzdesCacheableObserver.hhscoring / constraints / Constraint.fwd.hh
match_enzdes_util / EnzdesCacheableObserver.hhconformation / signals / LengthEvent.fwd.hh
match_enzdes_util / EnzdesCacheableObserver.hhpack / task / PackerTask.fwd.hh
match_enzdes_util / EnzdesCacheableObserver.hhpose / Pose.fwd.hh
match_enzdes_util / EnzdesCacheableObserver.hhconformation / Residue.fwd.hh
match_enzdes_util / EnzdesCacheableObserver.hhtypes.hh
match_enzdes_util / EnzdesCstCache.ccid / AtomID.hh
match_enzdes_util / EnzdesCstCache.ccscoring / constraints / Constraint.hh
match_enzdes_util / EnzdesCstCache.ccpose / Pose.hh
match_enzdes_util / EnzdesCstCache.ccchemical / ResidueType.hh
match_enzdes_util / EnzdesCstCache.ccid / SequenceMapping.hh
match_enzdes_util / EnzdesCstCache.hhscoring / constraints / Constraint.fwd.hh
match_enzdes_util / EnzdesCstCache.hhpose / Pose.fwd.hh
match_enzdes_util / EnzdesCstCache.hhid / SequenceMapping.fwd.hh
match_enzdes_util / EnzdesCstCache.hhtypes.hh
match_enzdes_util / EnzdesLoopsFile.hhtypes.hh
match_enzdes_util / EnzdesSeqRecoveryCache.ccpose / Pose.hh
match_enzdes_util / EnzdesSeqRecoveryCache.ccconformation / Residue.hh
match_enzdes_util / EnzdesSeqRecoveryCache.ccid / SequenceMapping.hh
match_enzdes_util / EnzdesSeqRecoveryCache.cctypes.hh
match_enzdes_util / EnzdesSeqRecoveryCache.hhpose / Pose.fwd.hh
match_enzdes_util / EnzdesSeqRecoveryCache.hhid / SequenceMapping.fwd.hh
match_enzdes_util / EnzdesSeqRecoveryCache.hhtypes.hh
match_enzdes_util / ExternalGeomSampler.hhtypes.hh
IGEdgeReweighters.ccpack / task / PackerTask.hh
IGEdgeReweighters.ccpose / PDBInfo.hh
IGEdgeReweighters.ccpose / Pose.hh
IGEdgeReweighters.ccconformation / Residue.hh
IGEdgeReweighters.hhpack / task / IGEdgeReweightContainer.hh
InteratomicVarianceMatrix.cctypes.hh
InteratomicVarianceMatrix.hhtypes.hh
match_enzdes_util / InvrotTarget.ccscoring / constraints / MultiConstraint.hh
match_enzdes_util / InvrotTarget.ccpose / Pose.hh
match_enzdes_util / InvrotTarget.ccconformation / Residue.hh
match_enzdes_util / InvrotTree.ccpack / rotamer_set / bb_independent_rotamers.hh
match_enzdes_util / InvrotTree.ccscoring / constraints / Constraint.hh
match_enzdes_util / InvrotTree.ccio / pdb / pdb_writer.hh
match_enzdes_util / InvrotTree.ccpose / Pose.hh
match_enzdes_util / InvrotTree.ccconformation / Residue.hh
match_enzdes_util / InvrotTree.ccconformation / ResidueFactory.hh
match_enzdes_util / InvrotTree.ccchemical / ResidueType.hh
match_enzdes_util / InvrotTree.hhscoring / constraints / Constraint.fwd.hh
match_enzdes_util / InvrotTree.hhpose / Pose.fwd.hh
match_enzdes_util / InvrotTree.hhtypes.hh
match_enzdes_util / InvrotTreeNode.ccscoring / constraints / AmbiguousConstraint.hh
match_enzdes_util / InvrotTreeNode.ccconformation / Atom.hh
match_enzdes_util / InvrotTreeNode.ccscoring / constraints / MultiConstraint.hh
match_enzdes_util / InvrotTreeNode.ccio / pdb / pdb_writer.hh
match_enzdes_util / InvrotTreeNode.ccpose / Pose.hh
match_enzdes_util / InvrotTreeNode.ccconformation / Residue.hh
match_enzdes_util / InvrotTreeNode.hhid / AtomID.fwd.hh
match_enzdes_util / InvrotTreeNodeBase.ccconformation / Residue.hh
match_enzdes_util / InvrotTreeNodeBase.hhscoring / constraints / Constraint.fwd.hh
match_enzdes_util / InvrotTreeNodeBase.hhpose / Pose.fwd.hh
match_enzdes_util / InvrotTreeNodeBase.hhconformation / Residue.fwd.hh
match_enzdes_util / InvrotTreeNodeBase.hhtypes.hh
KCluster.ccio / silent / SilentFileData.hh
KCluster.ccio / silent / SilentFileOptions.hh
KCluster.hhtypes.hh
match_enzdes_util / LigandConformer.ccid / AtomID.hh
match_enzdes_util / LigandConformer.ccchemical / AtomType.hh
match_enzdes_util / LigandConformer.ccconformation / Residue.hh
match_enzdes_util / LigandConformer.ccchemical / ResidueConnection.hh
match_enzdes_util / LigandConformer.hhid / AtomID.fwd.hh
match_enzdes_util / LigandConformer.hhconformation / Residue.fwd.hh
match_enzdes_util / LigandConformer.hhchemical / ResidueType.fwd.hh
match_enzdes_util / LigandConformer.hhtypes.hh
match_enzdes_util / MatchConstraintFileInfo.ccpack / rotamer_set / bb_independent_rotamers.hh
match_enzdes_util / MatchConstraintFileInfo.ccchemical / Patch.hh
match_enzdes_util / MatchConstraintFileInfo.ccconformation / Residue.hh
match_enzdes_util / MatchConstraintFileInfo.ccchemical / ResidueTypeSet.hh
match_enzdes_util / MatchConstraintFileInfo.ccchemical / ResidueTypeSet.srlz.hh
match_enzdes_util / MatchConstraintFileInfo.ccpose / variant_util.hh
match_enzdes_util / MatchConstraintFileInfo.ccchemical / VariantType.hh
match_enzdes_util / MatchConstraintFileInfo.hhpose / Pose.fwd.hh
match_enzdes_util / MatchConstraintFileInfo.hhconformation / Residue.fwd.hh
match_enzdes_util / MatchConstraintFileInfo.hhchemical / ResidueType.fwd.hh
match_enzdes_util / MatchConstraintFileInfo.hhchemical / ResidueTypeSet.fwd.hh
match_enzdes_util / MatchConstraintFileInfo.hhtypes.hh
NetworkAlgorithms.ccpose / Pose.hh
NetworkAlgorithms.ccconformation / Residue.hh
NetworkAlgorithms.hhpose / Pose.fwd.hh
NetworkAlgorithms.hhtypes.hh
pose_manipulation / pose_manipulation.ccid / AtomID_Map.hh
pose_manipulation / pose_manipulation.ccchemical / ChemicalManager.hh
pose_manipulation / pose_manipulation.ccconformation / Conformation.hh
pose_manipulation / pose_manipulation.ccscoring / Energies.hh
pose_manipulation / pose_manipulation.cckinematics / FoldTree.hh
pose_manipulation / pose_manipulation.cckinematics / MoveMap.hh
pose_manipulation / pose_manipulation.ccpack / task / operation / OperateOnResidueSubset.hh
pose_manipulation / pose_manipulation.ccpose / Pose.hh
pose_manipulation / pose_manipulation.ccconformation / Residue.hh
pose_manipulation / pose_manipulation.ccselect / residue_selector / ResidueIndexSelector.hh
pose_manipulation / pose_manipulation.ccchemical / ResidueProperties.hh
pose_manipulation / pose_manipulation.ccchemical / ResidueType.hh
pose_manipulation / pose_manipulation.ccchemical / ResidueTypeSet.hh
pose_manipulation / pose_manipulation.ccpack / task / operation / ResLvlTaskOperations.hh
pose_manipulation / pose_manipulation.ccscoring / rms_util.hh
pose_manipulation / pose_manipulation.ccscoring / ScoreFunction.hh
pose_manipulation / pose_manipulation.ccpack / task / operation / TaskOperations.hh
pose_manipulation / pose_manipulation.cctypes.hh
pose_manipulation / pose_manipulation.ccselect / util.hh
pose_manipulation / pose_manipulation.ccpose / util.hh
pose_manipulation / pose_manipulation.cckinematics / util.hh
pose_manipulation / pose_manipulation.ccchemical / util.hh
pose_manipulation / pose_manipulation.ccpose / util.tmpl.hh
pose_manipulation / pose_manipulation.ccpose / variant_util.hh
pose_manipulation / pose_manipulation.ccchemical / VariantType.hh
pose_manipulation / pose_manipulation.hhpose / Pose.fwd.hh
pose_manipulation / pose_manipulation.hhselect / residue_selector / ResidueSelector.fwd.hh
pose_manipulation / pose_manipulation.hhchemical / ResidueType.fwd.hh
pose_manipulation / pose_manipulation.hhchemical / ResidueTypeSet.fwd.hh
pose_manipulation / pose_manipulation.hhscoring / ScoreFunction.fwd.hh
pose_manipulation / pose_manipulation.hhtypes.hh
PyReturnValuePolicyTest.hhpose / Pose.hh
PyReturnValuePolicyTest.hhscoring / ScoreFunction.hh
PyReturnValuePolicyTest.hhscoring / ScoreFunctionFactory.hh
PyReturnValuePolicyTest.hhtypes.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccscoring / Energies.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpack / task / PackerTask.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpose / Pose.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccconformation / Residue.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpack / dunbrack / RotamerLibrary.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpack / rotamer_set / RotamerSet.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpack / rotamer_set / RotamerSet_.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpack / rotamers / SingleResidueRotamerLibrary.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccpack / rotamers / SingleResidueRotamerLibraryFactory.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.ccscoring / TenANeighborGraph.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhpack / rotamer_set / BumpSelector.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhpack / task / PackerTask.fwd.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhpose / Pose.fwd.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhconformation / Residue.fwd.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhpack / rotamer_set / RotamerSet.fwd.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhpack / rotamer_set / RotamerSetOperation.hh
rotamer_set_operations / RigidBodyMoveRotSetOps.hhscoring / ScoreFunction.fwd.hh
SamplerPlusPlus.hhpose / Pose.fwd.hh
SamplerPlusPlus.hhid / TorsionID.fwd.hh
SamplerPlusPlus.hhtypes.hh
rotamer_set_operations / SpecialRotamerRotSetOps.ccconformation / Residue.hh
rotamer_set_operations / SpecialRotamerRotSetOps.ccpack / rotamer_set / RotamerSet.hh
rotamer_set_operations / SpecialRotamerRotSetOps.ccpose / variant_util.hh
rotamer_set_operations / SpecialRotamerRotSetOps.ccchemical / VariantType.hh
rotamer_set_operations / SpecialRotamerRotSetOps.hhpack / task / PackerTask.fwd.hh
rotamer_set_operations / SpecialRotamerRotSetOps.hhpose / Pose.fwd.hh
rotamer_set_operations / SpecialRotamerRotSetOps.hhconformation / Residue.fwd.hh
rotamer_set_operations / SpecialRotamerRotSetOps.hhpack / rotamer_set / RotamerSet.fwd.hh
rotamer_set_operations / SpecialRotamerRotSetOps.hhpack / rotamer_set / RotamerSetOperation.hh
rotamer_set_operations / SpecialRotamerRotSetOps.hhscoring / ScoreFunction.fwd.hh
superimpose.ccid / AtomID.hh
superimpose.ccconformation / Conformation.hh
superimpose.cckinematics / Jump.hh
superimpose.ccid / NamedAtomID.hh
superimpose.ccpose / Pose.hh
superimpose.ccchemical / ResidueType.hh
superimpose.cckinematics / Stub.hh
superimpose.cctypes.hh
superimpose.hhpose / Pose.fwd.hh
superimpose.hhtypes.hh
sample_around / util.ccchemical / AA.hh
rigid_body / util.ccid / AtomID.hh
sample_around / util.ccio / silent / BinarySilentStruct.hh
sample_around / util.ccchemical / ChemicalManager.hh
sample_around / util.cckinematics / FoldTree.hh
rigid_body / util.cckinematics / FoldTree.hh
sample_around / util.ccimport_pose / import_pose.hh
sample_around / util.ccinit / init.hh
sample_around / util.cckinematics / Jump.hh
sample_around / util.cckinematics / MoveMap.hh
sample_around / util.ccpose / Pose.hh
rigid_body / util.ccpose / Pose.hh
sample_around / util.ccconformation / Residue.hh
rigid_body / util.ccconformation / Residue.hh
sample_around / util.ccconformation / ResidueFactory.hh
sample_around / util.ccchemical / ResidueTypeSet.hh
sample_around / util.ccscoring / rms_util.hh
rigid_body / util.ccscoring / rna / RNA_CentroidInfo.hh
sample_around / util.ccscoring / ScoreFunction.hh
sample_around / util.ccscoring / ScoreFunctionFactory.hh
sample_around / util.ccscoring / ScoringManager.hh
sample_around / util.ccio / silent / SilentFileData.hh
sample_around / util.cckinematics / Stub.hh
rigid_body / util.cckinematics / Stub.hh
sample_around / util.cctypes.hh
sample_around / util.ccpose / util.hh
sample_around / util.ccchemical / rna / util.hh
sample_around / util.ccchemical / util.hh
rigid_body / util.ccchemical / rna / util.hh
rigid_body / util.hhid / AtomID.fwd.hh
sample_around / util.hhpose / Pose.fwd.hh
rigid_body / util.hhpose / Pose.fwd.hh
rigid_body / util.hhconformation / Residue.fwd.hh
sample_around / util.hhscoring / ScoreFunction.fwd.hh
rigid_body / util.hhkinematics / Stub.fwd.hh
sample_around / util.hhtypes.hh
rigid_body / util.hhtypes.hh
match_enzdes_util / util_functions.ccscoring / constraints / AmbiguousConstraint.hh
match_enzdes_util / util_functions.cckinematics / tree / Atom.hh
match_enzdes_util / util_functions.ccid / AtomID.hh
match_enzdes_util / util_functions.cckinematics / AtomTree.hh
match_enzdes_util / util_functions.ccscoring / constraints / BackboneStubConstraint.hh
match_enzdes_util / util_functions.ccscoring / constraints / BoundConstraint.hh
match_enzdes_util / util_functions.ccconformation / Conformation.hh
match_enzdes_util / util_functions.ccscoring / constraints / CoordinateConstraint.hh
match_enzdes_util / util_functions.ccscoring / constraints / MultiConstraint.hh
match_enzdes_util / util_functions.ccpose / Pose.hh
match_enzdes_util / util_functions.ccconformation / Residue.hh
match_enzdes_util / util_functions.ccchemical / ResidueType.hh
match_enzdes_util / util_functions.cctypes.hh
match_enzdes_util / util_functions.hhscoring / constraints / AmbiguousConstraint.fwd.hh
match_enzdes_util / util_functions.hhid / AtomID.fwd.hh
match_enzdes_util / util_functions.hhscoring / func / Func.fwd.hh
match_enzdes_util / util_functions.hhpose / Pose.fwd.hh
match_enzdes_util / util_functions.hhconformation / Residue.fwd.hh
match_enzdes_util / util_functions.hhchemical / ResidueType.fwd.hh
match_enzdes_util / util_functions.hhtypes.hh