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methods Directory Reference
Directory dependency graph for methods:
src/core/scoring/methods

Directories

directory  dfire
 

Files

file  branch_energy_util.cc
 
file  branch_energy_util.hh
 
file  CartBondedParameters.hh
 
file  chainbreak_util.cc
 Utility functions for scoring chainbreaks.
 
file  chainbreak_util.hh
 Utility functions for scoring chainbreaks.
 
file  ContextDependentLRTwoBodyEnergy.cc
 Context-Dependent, Long-Range, Two-Body Energy class implementation.
 
file  ContextDependentLRTwoBodyEnergy.fwd.hh
 Context-Dependent, Long-Range, Two-Body Energy Method class forward declaration.
 
file  ContextDependentLRTwoBodyEnergy.hh
 
file  ContextDependentOneBodyEnergy.cc
 
file  ContextDependentOneBodyEnergy.fwd.hh
 
file  ContextDependentOneBodyEnergy.hh
 
file  ContextDependentTwoBodyEnergy.cc
 Score function class.
 
file  ContextDependentTwoBodyEnergy.fwd.hh
 Forward declaration for the Context-Dependent (ShortRange) Two-Body EnergyMethod base class.
 
file  ContextDependentTwoBodyEnergy.hh
 
file  ContextIndependentLRTwoBodyEnergy.cc
 Context-Independent, Long-Range, Two-Body Energy class implementation.
 
file  ContextIndependentLRTwoBodyEnergy.fwd.hh
 Context-Independent, Long-Range, Two-Body Energy Method class forward declaration.
 
file  ContextIndependentLRTwoBodyEnergy.hh
 Context-Dependent, Long-Range, Two-Body Energy class declaration.
 
file  ContextIndependentOneBodyEnergy.cc
 
file  ContextIndependentOneBodyEnergy.fwd.hh
 
file  ContextIndependentOneBodyEnergy.hh
 
file  ContextIndependentTwoBodyEnergy.cc
 
file  ContextIndependentTwoBodyEnergy.fwd.hh
 
file  ContextIndependentTwoBodyEnergy.hh
 Short ranged, context-independent, two-body energy class declaration.
 
file  EnergyMethod.cc
 
file  EnergyMethod.fwd.hh
 Energy Method class forward declaration and EnergyMethodType enum definition.
 
file  EnergyMethod.hh
 
file  EnergyMethodCreator.fwd.hh
 Base class for EnergyMethod factory-registration and creation classes.
 
file  EnergyMethodCreator.hh
 Declaration of the base class for EnergyMethod factory registration and creation.
 
file  EnergyMethodOptions.cc
 
file  EnergyMethodOptions.fwd.hh
 
file  EnergyMethodOptions.hh
 
file  EnergyMethodRegistrator.hh
 Declaration of the base class for EnergyMethod factory registration and creation.
 
file  FreeDOF_Options.cc
 
file  FreeDOF_Options.fwd.hh
 
file  FreeDOF_Options.hh
 
file  LongRangeTwoBodyEnergy.cc
 Long-Range, Two-Body Energy class implementation.
 
file  LongRangeTwoBodyEnergy.fwd.hh
 Long range two body energy method class forward declaration.
 
file  LongRangeTwoBodyEnergy.hh
 Long range two body energy method class declaration.
 
file  Methods.hh
 Energy Method enumeration.
 
file  MMBondAngleEnergy.cc
 
file  MMBondAngleEnergy.fwd.hh
 molecular mechanics bond angle energy forward declaration
 
file  MMBondAngleEnergy.hh
 molecular mechanics bond angle energy
 
file  MMBondAngleEnergyCreator.hh
 Declaration for the class that connects MMBondAngleEnergy with the ScoringManager.
 
file  MMBondLengthEnergy.cc
 
file  MMBondLengthEnergy.fwd.hh
 Molecular mechanics bond length score class.
 
file  MMBondLengthEnergy.hh
 Molecular mechanics bond length score class.
 
file  MMBondLengthEnergyCreator.hh
 Molecular mechanics bond length score class.
 
file  MMLJEnergyInter.cc
 
file  MMLJEnergyInter.fwd.hh
 molecular mechanics lj energy forward declaration
 
file  MMLJEnergyInter.hh
 molecular mechanics lj energy
 
file  MMLJEnergyInterCreator.hh
 Declaration for the class that connects MMLJEnergyInter with the ScoringManager.
 
file  MMLJEnergyIntra.cc
 
file  MMLJEnergyIntra.fwd.hh
 molecular mechanics lj energy forward declaration
 
file  MMLJEnergyIntra.hh
 molecular mechanics lj energy
 
file  MMLJEnergyIntraCreator.hh
 Declaration for the class that connects MMLJEnergyIntra with the ScoringManager.
 
file  MMTorsionEnergy.cc
 
file  MMTorsionEnergy.fwd.hh
 molecular mechanics torsion energy forward declaration
 
file  MMTorsionEnergy.hh
 molecular mechanics torsion energy
 
file  MMTorsionEnergyCreator.hh
 Declaration for the class that connects MMTorsionEnergy with the ScoringManager.
 
file  OneBodyEnergy.cc
 
file  OneBodyEnergy.fwd.hh
 
file  OneBodyEnergy.hh
 
file  PyEnergyMethodRegisterer.hh
 EnergyMethod factory registration and creation in PyRosetta.
 
file  ShortRangeTwoBodyEnergy.cc
 Short-Range, Two-Body Energy Method base class implementation.
 
file  ShortRangeTwoBodyEnergy.fwd.hh
 Short Range Two Body Energy Method base class forward declaration.
 
file  ShortRangeTwoBodyEnergy.hh
 Short Range Two Body Energy Method base class declaration.
 
file  TwoBodyEnergy.cc
 Two Body Energy Method base class implementation.
 
file  TwoBodyEnergy.fwd.hh
 Two Body Energy Method base class forward declaration.
 
file  TwoBodyEnergy.hh
 Two Body Energy Method base class declaration.
 
file  util.cc
 utility methods for scoring.
 
file  util.hh
 Utility functions for the distance-dependent dielectric potential.
 
file  WholeStructureEnergy.cc
 Implementation of the EnergyMethod that applies to a whole structure and not on a residue-by-residue basis.
 
file  WholeStructureEnergy.fwd.hh
 EnergyMethod that applies to a whole structure and not on a residue-by-residue basis.
 
file  WholeStructureEnergy.hh
 EnergyMethod that applies to a whole structure and not on a residue-by-residue basis.