hi everyone!
I install rosetta 3 using the compiler gcc3.4 , miss error:
io -I/usr/include -I/usr/local/include src/protocols/init/init.cc
{standard input}: Assembler messages:
{standard input}:53281: Warning: end of file not at end of a line; newline inserted
{standard input}: Error: .size expression for _ZN5boost6detail17sp_counted_impl_pIN9protocols24protein_interface_design6movers26BestHotspotCstMoverCreatorEED0Ev does not evaluate to a constant
g++: internal compiler error: Killed (program cc1plus)
Please submit a full bug report,
with preprocessed source if appropriate.
See <http://bugzilla.redhat.com/bugzilla> for instructions.
scons: *** [build/src/release/linux/3.10/64/x86/gcc/4.8/default/protocols/init/init.os] Error 4
scons: building terminated because of errors.
when i use clang complie rosetta, miss error:
bxml2/include -Iexternal -Iexternal/dbio -I/usr/include -I/usr/local/include src/core/init/score_function_corrections.cc
clang: error: unable to execute command: Killed
clang: error: clang frontend command failed due to signal (use -v to see invocation)
clang version 3.4.2 (tags/RELEASE_34/dot2-final)
Target: x86_64-redhat-linux-gnu
Thread model: posix
clang: note: diagnostic msg: PLEASE submit a bug report to http://llvm.org/bugs/ and include the crash backtrace, preprocessed source, and associated run script.
clang: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
clang: note: diagnostic msg: /tmp/score_function_corrections-89c673.cpp
clang: note: diagnostic msg: /tmp/score_function_corrections-89c673.sh
clang: note: diagnostic msg:
********************
scons: *** [build/src/release/linux/3.10/64/x86/clang/3.4/default/core/init/score_function_corrections.os] Error 254
scons: building terminated because of errors.
please sovle this problem, thank you !
Which version of Rosetta are you attempting to compile? (3.8, 3.7, one of the weeklies?) Also, what is the commandline you're using to launch the compilation? Also, have you done anything with the Rosetta site.settings or user.settings files?
Note that the most recent versions of Rosetta (such as 3.8) will need a C++11 compliant compiler (https://www.rosettacommons.org/docs/latest/build_documentation/Cxx11Support). This means that GCC 3.4 isn't going to work -- you'll probably want GCC 4.8 or later. Clang 3.4 should be okay, though.