I want to use Rosetta backrub for peptide design. by I faced an error that I think it caused to incompatible .py and .sh files and Rosetta 3.9 2018 version. I searched a lot on Rosetta website to find out any example of .py and .sh file that they need for running Rosetta Backrub. my error was ERROR: unable to open MM atom type set file:/home/nanobio/amin/rosetta_database/chemical/mm_atom_type_sets/fa_standard/mm_atom_properties.txt ERRoR: Exit from: src/core/chemical/MMAtomTypeSet.cc line 64".
Another weird thing that happened to me was the name of _last.pdb and _low.pdb files. these files generated but with a weird name that combination of two pep_7 numbering like" pep7_R_0001pep7_R_0003_last.pdb"
I will attach you all of my running file please help me what is my problem and how I can solve it.
for attach .sh file I must change .sh file to .txt.