I have downloaded Rosetta 3.11 and built it with Scons.py using
$ ./scons.py -j 4 mode=release bin
The building of the binaries seems to work correctly providing me with:
scons: done building targets.
I am now attempting to familiarize myself with Rosetta by traversing the tutorials starting with the Input & Output Tutorial so I am within this directory:
Following the tutorial it asks for the following command:
> $ROSETTA3/bin/score_jd2.default.linuxgccrelease -in:file:s input_files/1qys.pdb
My input: > my path/Rosetta/main/source/bin/score_jd2.default.macosclangrelease -in:file:s input_files/1qys.pdb
This throws the error:
Desktop/Rosetta/main/source/bin/score_jd2.default.macosclangrelease: No such file or directory
When I try, sudo > -in:file:s input_files/1qys.pdb this also throws the error:
sudo: input_files/1qys.pdb: command not found
I am quite confused as to how this occurs as I have triple checked my path to the directories and everything appears correct.