Hello. I am trying to get my RNA as a ligand in Remodel and according to rosetta documentation it should be read directly but my format is somehow off.
-score:set_weights coordinate_constraint 4.0
tried in:file:extra_res_fa. Same just error thrown earlier.
I tried getting RNA as a param file but i get stuck at splitting P-O3' bonds (rotable bonds definitions, torsions,etc.)
ATOM 1 P RGU B1138 50.994 77.831 92.006 1.00 76.88 P