hi all,
I have a haripin RNA, and I want to predict its structure by rna_denovo. After I have finished the rna_denovo process for 100 decoys, I got one decoy with the lowest value of score(rna-denovo.1.pdb, the score is -10.57, seems normal). But when rescore this pdb file by rna_score programm the results are rna-score_0001.pdb and rna-score.sc(the energy total_score is 19.883 which seems abnormal). Does someone know the difference between the rna_denovo and rna_score in the scoring functon? The program is rosetta_src_2020.50.61505_bundle(mpi edition). rna-denovo.1.pdb, rna-score_0001.pdb and rna-score.sc are all attached below.
| Attachment | Size |
|---|---|
 rna_score.mpi | 571 bytes |
 rna_denovo pdb | 25.55 KB |
| pdb from rna_score | 27.02 KB |
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I have a similar issue. Would be great to get a response on this question and my own which I recently posted