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simple_cycpep_predict thioether_lariat option

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simple_cycpep_predict thioether_lariat option
#1

Hi all,

I'm trying to use simple_cycpep_predict with the option thioether_lariat for cyclization_type but seem to be running into a problem.  Based on what I read in the help docs, "thioether_lariat" should be an option that is possible, but when I tried to use it, I get:

ERROR: Illegal value specified for option -cyclic_peptide:cyclization_type : thioether_lariat

Is this an option that got removed and the help pages just weren't updated? Or am I missing something? I am attaching the the sequence that I am trying to model.

Thanks!

Best,

Ken

AttachmentSize
compstatin_thioether.txt51 bytes
Post Situation: 
Mon, 2022-03-14 15:14
Ken