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protein binder interface design error

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protein binder interface design error
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Hi! I ran into a problem when I was repeating the article "Design of protein binding proteins from target structure alone". The protocol I was followed is cao_2021_protocl_guide.txt. The step I was running is 12th: running a pilot job which is a protein interface design. could anyone help solve this problem?

command line:  cd /home/newdisk1/binder_design/paper_interface_design_pilot/00000;/home/newdisk1/rosetta.binary.linux.release-315/main/source/bin/rosetta_scripts.hdf5.linuxgccrelease -parser:protocol /home/zhengjishen/Desktop/caolongxing_protocol/cao_2021_protocol/paper_interface_design.xml -beta_nov16 -in:file:silent /home/newdisk1/binder_design/pilot_splits/xah.silent -keep_input_scores False -silent_read_through_errors -out:file:silent out.silent -out:file:silent_struct_type binary -mute protocols.rosetta_scripts.ParsedProtocol.REPORT -parser:script_vars CAO_2021_PROTOCOL=/home/zhengjishen/Desktop/caolongxing_protocol/cao_2021_protocol @/home/newdisk1/binder_design/design.flags  > log.log 2>&1

results:

crash.log
[FILE]: src/core/scoring/packing/surf_vol.cc
[LINE]: 164
[START_MESSAGE]
[ ERROR ] UtilityExitException
ERROR: 

log.log:

WARNING!! DALPHABALL output nan at index 128
DALPHABALL output indicies not matching! 1!=128

ERROR:: Exit from: src/core/scoring/packing/surf_vol.cc line: 164
protocols.rosetta_scripts.ParsedProtocol: [ ERROR ] Exception while processing procotol: 

File: src/core/scoring/packing/surf_vol.cc:164
[ ERROR ] UtilityExitException
ERROR: 


protocols.jd2.JobDistributor: [ ERROR ] 

[ERROR] Exception caught by JobDistributor for job HHHH_bc_00797_000000001_0001

[ ERROR ]: Caught exception:


File: src/core/scoring/packing/surf_vol.cc:164
[ ERROR ] UtilityExitException
ERROR: 
 

AttachmentSize
ROSETTA_CRASH.log8.38 KB
log.log321.17 KB
Category: 
Post Situation: 
Thu, 2022-06-23 04:43
guowuchen