08.02-Ligand-Docking-pyrosetta.distributed.ipynb
When I ran the following syntax in this file, an error came out and it did not proceed.
if not os.getenv("DEBUG"):
%time results = list(xml_obj(pose_obj))
I also set up Conda on Google Collabor
There is an error, do you know how to solve it?
The results of the implementation were as follows
core.optimization.Minimizer: [ WARNING ] LBFGS MAX CYCLES 50 EXCEEDED, BUT FUNC NOT CONVERGED! core.optimization.Minimizer: [ WARNING ] LBFGS MAX CYCLES 50 EXCEEDED, BUT FUNC NOT CONVERGED! core.optimization.Minimizer: [ WARNING ] LBFGS MAX CYCLES 50 EXCEEDED, BUT FUNC NOT CONVERGED!
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NotImplementedError Traceback (most recent call last)
<timed exec> in <module>
/usr/local/lib/python3.7/dist-packages/pyrosetta/distributed/packed_pose/core.py in <genexpr>(.0) 160 @generic_func.register(collections.abc.Generator) 161 def generator_traversal(generator): --> 162 return (generic_func(v) for v in generator) 163 164 return generic_func
5 frames
/usr/local/lib/python3.7/dist-packages/pyrosetta/distributed/utility/pickle.py in __cereal_getstate__(self) 35 if not cereal: 36 raise NotImplementedError( ---> 37 "__cereal_getstate__ requires pyrosetta '--serialization' build.") 38 39 oss = rosetta.std.ostringstream()
NotImplementedError: __cereal_getstate__ requires pyrosetta '--serialization' build.
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