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Parallel Installation of ROSETTA3.1

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Parallel Installation of ROSETTA3.1


I want to install ROSETTA3.1 in a parallel environment, to make it run
on 16 processors through MPI. Should I use the following command for installation:

scons -j16 bin mode=release

Please advice.



Mon, 2009-12-07 21:09

To compile rosetta for MPI, you need to add extras=mpi to that command line:

scons -j16 bin mode=release extras=mpi

If MPI is installed it should go smoothly from there. The job distributor detects that it is compiled in MPI mode (via #ifdef) and will run in parallel automatically. I'm not sure that every application properly supports MPI, though.

Tue, 2009-12-08 06:39