Hi Everyone. I have a question for RosettaAntibody in local machine.
I installed Rosetta++ in my local machine, and downloaded all database related NCBI. and then I have tried to made Fv homology modeling by RosettaAntibody in my local machine.
Just after executing bash, which was generated in build folder, I confirmed the strucure PDB files. They all defects 3 amino acid residues in both (N- C-) terminal region. But in RosettaAntibody Server, the final output candidate structures have all amino acid reisudes.
Is it ordinary phenomenon? or I didn't add any particular options for modeling all residues at runninng rosetta++?