You are here

Having trouble producing a .pdb file from a silent output file after running abinitio relax

3 posts / 0 new
Last post
Having trouble producing a .pdb file from a silent output file after running abinitio relax
#1

Well I have run AbinitioRelax.linuxgccrelease for the first time and had it produce a t000_silent.out file. The documentation says to use score.linuxgccrelease but that no longer exists in rosetta 3.2. What do I need to do to get .pdb files from the silent output file? Thanks.

Post Situation: 
Wed, 2011-03-09 12:48
burkheadlab

Silent files are such a pain.

Try score_jd2 or extract_pdbs. (I think the sole purpose of extract_pdbs is this).

Wed, 2011-03-09 12:59
smlewis

Thanks, I tried extract_pdbs and that worked.

Wed, 2011-03-09 14:25
burkheadlab