I have a question regarding constraints and satisfied constraints scoring.
I'm using constraint files for ab initio modeling but I can't see any attributed constraint's score in the score.sc file. Is there a special command that I need to add to obtain constrain scores for calculated structures? Which one and where should it be added (the website recommendation is not clear to me)?
The question arise because in my log output file I see the program reading the constraints but the number of violation is always 0 despite the constraints being unsatisfied! I’m doubting if the constraints are really being applied during the modeling or not.
Thanks for your attention,
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Constraints and final scoring of satisfied constraints in ab initio