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Remodel: neighbor cutoff

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Remodel: neighbor cutoff
#1

Hi

I am trying to design and sample a loop using Remodel. Residues that are interacting but farther away than 6 A are not being repacked (using the -find_neighbors) and I would like to increase the cutoff. How can I change this parameter?

thanks in advance

felipet

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Wed, 2014-07-16 08:11
felipet

As I read the code, you should be able to adjust the neighbor cutoff distance with the option -pose_metrics:neighbor_by_distance_cutoff

Thu, 2014-07-17 08:59
rmoretti

it is working!

Thanks a lot

felipet

Thu, 2014-07-17 10:13
felipet