I'm having trouble generating a fragment file. The server Robetta has 1000aa limit. So, I decided to use my pc to generate the file.
Inside the folder /rosetta/tools/fragment_tools/ there is a readme file that tells how to install. Follow the steps recommended in the file, and when i run the program make_fragments.pl it creates several files, unless the fragment file(generated files follow below).
I found a different folder /rosetta/demos/public/fragment_picker another way, a little more complex to generate the fragment file, but not sure if it works. This way work?
How can I generate this fragment file without using the server Robetta?
Someone could help me?