As each stage of AbInitio protocol call a different function (score0, score1, score2, score5 e score3), it appears to me that use a single cst_weight in my command line doesn't make sense (a single weight for every single stage). For that reason, I would like to test different weights for cst in each stage of Abinitio.
For doing so, for example, I have created for stage0 a score0.wts_patch and added to the command line the flag -stage1_patch with this file. When I don't input a cst_file, the stage0 returns the weight from the *patch file. For example, atom_pair_constraint (weight) 0.1. However, once the cst_file is provide the default weight of 1.0 "overwrites" what is in the *patch file. Note that there is no cst_weight flag when I run this example. If I change de vdw weight for example in the *patch file, the vdw weight is hold while the cst weight is overwritten.
So, how to provide a cst_file and have different constraints weight to each stage I am interested in?