core.init: Checking for fconfig files in pwd and ./rosetta/flags 
core.init: Rosetta version: rosetta.binary.linux.release-210 r210 2019.06+release.4d8c807 4d8c8074e4eab340e5d26c0069d807aa5a8d6978 https://www.rosettacommons.org 2019-02-08T22:29:28.907993
core.init: command: InterfaceAnalyzer.default.linuxgccrelease -s complex_0_ignorechain.pdb -packstat 1 -fixedchains E F @pack_input_options.txt -overwrite
core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-1863645911 seed_offset=0 real_seed=-1863645911
core.init.random: RandomGenerator:init: Normal mode, seed=-1863645911 RG_type=mt19937
core.init: Resolved executable path: /home/mxp/apps/rosetta/main/source/build/src/release/linux/3.10/64/x86/gcc/8/default/InterfaceAnalyzer.default.linuxgccrelease
core.init: Looking for database based on location of executable: /home/mxp/apps/rosetta/main/database/
protocols.jd2.PDBJobInputter: Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: pushed complex_0_ignorechain.pdb nstruct index 1
protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... 
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: ref2015
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBPoly1D.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBFadeIntervals.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBEval.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/DonStrength.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/AccStrength.csv
core.chemical.GlobalResidueTypeSet: Finished initializing fa_standard residue type set.  Created 696 residue types
core.chemical.GlobalResidueTypeSet: Total time to initialize 2.1 seconds.
basic.io.database: Database file opened: scoring/score_functions/rama/fd/all.ramaProb
basic.io.database: Database file opened: scoring/score_functions/rama/fd/prepro.ramaProb
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.all.txt
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.gly.txt
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.pro.txt
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.valile.txt
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
core.scoring.P_AA: shapovalov_lib::shap_p_aa_pp_smooth_level of 1( aka low_smooth ) got activated.
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa131/a20.prop
protocols.jd2.PDBJobInputter: PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: filling pose from PDB complex_0_ignorechain.pdb
core.import_pose.import_pose: File 'complex_0_ignorechain.pdb' automatically determined to be of type PDB
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] skipping pdb residue b/c it's missing too many mainchain atoms:    1 H GLU GLU:NtermProteinFull:triazolamerC
core.io.pose_from_sfr.PoseFromSFRBuilder: missing:  CT1
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] skipping pdb residue b/c it's missing too many mainchain atoms:  116 L ALA ALA:NtermProteinFull:triazolamerC
core.io.pose_from_sfr.PoseFromSFRBuilder: missing:  CT1
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] skipping pdb residue b/c it's missing too many mainchain atoms:  224 E CYS CYS:NtermProteinFull:triazolamerC
core.io.pose_from_sfr.PoseFromSFRBuilder: missing:  CT1
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] skipping pdb residue b/c it's missing too many mainchain atoms:  368 F CYS CYS:NtermProteinFull:triazolamerC
core.io.pose_from_sfr.PoseFromSFRBuilder: missing:  CT1
core.io.pose_from_sfr.PoseFromSFRBuilder: Adding undetected lower terminus type to residue 2,    2 H
core.io.pose_from_sfr.PoseFromSFRBuilder: Adding undetected lower terminus type to residue 117,  117 L
core.io.pose_from_sfr.PoseFromSFRBuilder: Adding undetected lower terminus type to residue 225,  225 E
core.io.pose_from_sfr.PoseFromSFRBuilder: Adding undetected lower terminus type to residue 369,  369 F
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 2 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL:NtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 3 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 4 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 5 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 6 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 7 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 8 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 9 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 10 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 11 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 12 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 13 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 14 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 15 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 16 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 17 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 18 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 19 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 20 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 21 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 22 in file complex_0_ignorechain.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 23 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 24 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 25 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 26 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 27 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 28 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 29 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 30 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 31 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 32 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 33 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 34 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 35 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 36 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 37 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 38 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 39 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 40 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 41 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 42 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 43 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 44 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 45 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 46 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 47 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 48 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 49 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 50 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 51 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 52 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 53 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 54 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 55 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 56 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 57 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 58 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 59 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 60 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 61 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 62 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 63 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 64 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 65 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 66 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 67 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 68 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 69 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 70 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 71 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 72 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 73 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 74 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 75 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 76 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 77 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 78 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 79 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 80 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 81 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 82 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 83 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 84 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 85 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 86 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 87 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 88 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 89 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 90 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 91 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 92 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 93 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 94 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 95 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 96 in file complex_0_ignorechain.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 97 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 98 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 99 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 100 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 101 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 102 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 103 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 104 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 105 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 106 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 107 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 108 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 109 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 110 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 111 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 112 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 113 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 114 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 115 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER:CtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 117 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU:NtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 118 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 119 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 120 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 121 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 122 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 123 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 124 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 125 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 126 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 127 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 128 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 129 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 130 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 131 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 132 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 133 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 134 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 135 in file complex_0_ignorechain.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 136 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 137 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 138 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 139 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 140 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 141 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 142 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 143 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 144 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 145 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 146 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 147 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 148 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 149 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 150 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 151 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 152 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 153 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 154 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 155 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 156 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 157 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 158 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 159 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 160 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 161 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 162 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 163 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 164 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 165 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 166 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 167 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 168 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 169 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 170 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 171 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 172 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 173 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 174 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 175 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 176 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 177 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 178 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 179 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 180 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 181 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 182 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 183 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 184 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 185 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 186 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 187 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 188 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 189 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 190 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 191 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 192 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 193 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 194 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 195 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 196 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 197 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 198 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 199 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 200 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 201 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 202 in file complex_0_ignorechain.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 203 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 204 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 205 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 206 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 207 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 208 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 209 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 210 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 211 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 212 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 213 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 214 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 215 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 216 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 217 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 218 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 219 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 220 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 221 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 222 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 223 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU:CtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 225 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU:NtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 226 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 227 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 228 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 229 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 230 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 231 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 232 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 233 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 234 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 235 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 236 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 237 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 238 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 239 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 240 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 241 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 242 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 243 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 244 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 245 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 246 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 247 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 248 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 249 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 250 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 251 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 252 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 253 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 254 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 255 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 256 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 257 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 258 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 259 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 260 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 261 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 262 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 263 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 264 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 265 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 266 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 267 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 268 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 269 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 270 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 271 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 272 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 273 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 274 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 275 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 276 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 277 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 278 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 279 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 280 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 281 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 282 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 283 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 284 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 285 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 286 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 287 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 288 in file complex_0_ignorechain.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 289 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 290 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 291 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 292 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 293 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 294 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 295 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 296 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 297 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 298 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 299 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 300 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 301 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 302 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 303 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 304 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 305 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 306 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 307 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 308 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 309 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 310 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 311 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 312 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 313 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 314 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 315 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 316 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 317 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 318 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 319 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 320 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 321 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 322 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 323 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 324 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 325 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 326 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 327 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 328 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 329 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 330 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 331 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 332 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 333 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 334 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 335 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 336 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 337 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 338 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 339 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 340 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 341 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 342 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 343 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 344 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 345 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 346 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 347 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 348 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 349 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 350 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 351 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 352 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 353 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 354 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 355 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 356 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 357 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 358 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 359 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 360 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 361 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 362 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 363 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 364 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 365 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 366 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 367 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER:CtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 369 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU:NtermProteinFull
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 370 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 371 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 372 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 373 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 374 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 375 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 376 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 377 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 378 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 379 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 380 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 381 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 382 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 383 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 384 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 385 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 386 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 387 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 388 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 389 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 390 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 391 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 392 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 393 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 394 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 395 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 396 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 397 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 398 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 399 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 400 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 401 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 402 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 403 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 404 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 405 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 406 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 407 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 408 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 409 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 410 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 411 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 412 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 413 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 414 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 415 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 416 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 417 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 418 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 419 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 420 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 421 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 422 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 423 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 424 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 425 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 426 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 427 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 428 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 429 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 430 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 431 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 432 in file complex_0_ignorechain.pdb. Best match rsd_type:  CYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 433 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 434 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 435 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 436 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 437 in file complex_0_ignorechain.pdb. Best match rsd_type:  MET
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 438 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 439 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 440 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 441 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 442 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 443 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 444 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 445 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 446 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 447 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 448 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 449 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 450 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 451 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 452 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 453 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 454 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 455 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 456 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 457 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 458 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 459 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 460 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 461 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 462 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 463 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 464 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 465 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 466 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 467 in file complex_0_ignorechain.pdb. Best match rsd_type:  LYS
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 468 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 469 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 470 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 471 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 472 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 473 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 474 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 475 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 476 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 477 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 478 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 479 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 480 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 481 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLY
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 482 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 483 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 484 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 485 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 486 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 487 in file complex_0_ignorechain.pdb. Best match rsd_type:  GLU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 488 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 489 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 490 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 491 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 492 in file complex_0_ignorechain.pdb. Best match rsd_type:  PHE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 493 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 494 in file complex_0_ignorechain.pdb. Best match rsd_type:  VAL
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 495 in file complex_0_ignorechain.pdb. Best match rsd_type:  TRP
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 496 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 497 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 498 in file complex_0_ignorechain.pdb. Best match rsd_type:  THR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 499 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 500 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 501 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 502 in file complex_0_ignorechain.pdb. Best match rsd_type:  TYR
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 4 atoms at position 503 in file complex_0_ignorechain.pdb. Best match rsd_type:  ARG
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 504 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 505 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 506 in file complex_0_ignorechain.pdb. Best match rsd_type:  ASN
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 1 atoms at position 507 in file complex_0_ignorechain.pdb. Best match rsd_type:  ALA
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 3 atoms at position 508 in file complex_0_ignorechain.pdb. Best match rsd_type:  PRO
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 6 atoms at position 509 in file complex_0_ignorechain.pdb. Best match rsd_type:  ILE
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 2 atoms at position 510 in file complex_0_ignorechain.pdb. Best match rsd_type:  LEU
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] discarding 5 atoms at position 511 in file complex_0_ignorechain.pdb. Best match rsd_type:  SER:CtermProteinFull
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 50
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 69
core.conformation.Conformation: [ WARNING ] missing heavyatom:  O   on residue SER:CtermProteinFull 114
core.conformation.Conformation: [ WARNING ] missing heavyatom:  OXT on residue SER:CtermProteinFull 114
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 129
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 131
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 160
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 187
core.conformation.Conformation: [ WARNING ] missing heavyatom:  O   on residue LEU:CtermProteinFull 221
core.conformation.Conformation: [ WARNING ] missing heavyatom:  OXT on residue LEU:CtermProteinFull 221
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 230
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 283
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 328
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 349
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 362
core.conformation.Conformation: [ WARNING ] missing heavyatom:  O   on residue SER:CtermProteinFull 364
core.conformation.Conformation: [ WARNING ] missing heavyatom:  OXT on residue SER:CtermProteinFull 364
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 373
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 426
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 471
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 492
core.conformation.Conformation: [ WARNING ] missing heavyatom:  CD1 on residue ILE 505
core.conformation.Conformation: [ WARNING ] missing heavyatom:  O   on residue SER:CtermProteinFull 507
core.conformation.Conformation: [ WARNING ] missing heavyatom:  OXT on residue SER:CtermProteinFull 507
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 50 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 69 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom  OT1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 114 atom  OT2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 129 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 131 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 160 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 187 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 221 atom  OT1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 221 atom  OT2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 230 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 283 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 328 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 349 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 362 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 364 atom  OT1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 364 atom  OT2 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 373 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 426 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 471 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 492 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 505 atom  CD  (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 507 atom  OT1 (trying to store temperature in PDBInfo)
core.io.pose_from_sfr.PoseFromSFRBuilder: [ WARNING ] can't find pose atom for file-residue 507 atom  OT2 (trying to store temperature in PDBInfo)
core.pack.pack_missing_sidechains: packing residue number 50 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 69 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 129 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 131 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 160 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 187 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 230 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 283 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 328 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 349 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 362 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 373 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 426 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 471 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 492 because of missing atom number 8 atom name  CD1
core.pack.pack_missing_sidechains: packing residue number 505 because of missing atom number 8 atom name  CD1
core.pack.task: Packer task: initialize from command line() 
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: ref2015
basic.io.database: Database file opened: scoring/score_functions/elec_cp_reps.dat
core.scoring.elec.util: Read 40 countpair representative atoms
core.pack.dunbrack.RotamerLibrary: shapovalov_lib_fixes_enable option is true.
core.pack.dunbrack.RotamerLibrary: shapovalov_lib::shap_dun10_smooth_level of 1( aka lowest_smooth ) got activated.
core.pack.dunbrack.RotamerLibrary: Binary rotamer library selected: /home/mxp/apps/rosetta/main/database/rotamer/shapovalov/StpDwn_0-0-0/Dunbrack10.lib.bin
core.pack.dunbrack.RotamerLibrary: Using Dunbrack library binary file '/home/mxp/apps/rosetta/main/database/rotamer/shapovalov/StpDwn_0-0-0/Dunbrack10.lib.bin'.
core.pack.dunbrack.RotamerLibrary: Dunbrack 2010 library took 0.43 seconds to load from binary
core.pack.pack_rotamers: built 39 rotamers at 16 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: ref2015
apps.public.analysis.InterfaceAnalyzer: [ ERROR ] pose has only one chain, skipping
protocols.jd2.JobDistributor: [ WARNING ] complex_0_ignorechain_0001 reported that its input was bad and will not retry
protocols.jd2.FileSystemJobDistributor: job failed, reporting bad input; other jobs of same input will be canceled: complex_0_ignorechain_0001
protocols.jd2.JobDistributor: no more batches to process... 
protocols.jd2.JobDistributor: 1 jobs considered, 1 jobs attempted in 6 seconds
caught exception 

File: src/protocols/jd2/JobDistributor.cc:328
1 jobs failed; check output for error messages