core.init: (3) Rosetta version exported  from http://www.rosettacommons.org
core.init: (3) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
core.init: (0) Rosetta version exported  from http://www.rosettacommons.org
core.init: (0) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
core.init: (0) 'RNG device' seed mode, using '/dev/urandom', seed=-1969830130 seed_offset=0 real_seed=-1969830130
core.init.random: (0) RandomGenerator:init: Normal mode, seed=-1969830130 RG_type=mt19937
core.init: (0) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (0) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
protocols.jd2.PDBJobInputter: (0) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (0) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (0) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (0) Evaluation Creator active ... 
basic.io.database: (0) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
core.init: (7) Rosetta version exported  from http://www.rosettacommons.org
core.init: (7) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
core.init: (1) Rosetta version exported  from http://www.rosettacommons.org
core.init: (1) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
core.init: (2) Rosetta version exported  from http://www.rosettacommons.org
core.init: (2) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
basic.io.database: (0) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (0) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
core.init: (6) Rosetta version exported  from http://www.rosettacommons.org
core.init: (6) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
basic.io.database: (0) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (0) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
core.init: (1) 'RNG device' seed mode, using '/dev/urandom', seed=-1379419849 seed_offset=0 real_seed=-1969830129
core.init.random: (1) RandomGenerator:init: Normal mode, seed=-1969830129 RG_type=mt19937
core.init: (2) 'RNG device' seed mode, using '/dev/urandom', seed=-1438739562 seed_offset=0 real_seed=-1969830128
core.init.random: (2) RandomGenerator:init: Normal mode, seed=-1969830128 RG_type=mt19937
core.init: (3) 'RNG device' seed mode, using '/dev/urandom', seed=-484363813 seed_offset=0 real_seed=-1969830127
core.init.random: (3) RandomGenerator:init: Normal mode, seed=-1969830127 RG_type=mt19937
core.init: (7) 'RNG device' seed mode, using '/dev/urandom', seed=-783891451 seed_offset=0 real_seed=-1969830123
core.init.random: (7) RandomGenerator:init: Normal mode, seed=-1969830123 RG_type=mt19937
core.init: (1) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (2) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (3) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (3) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
core.init: (1) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
core.init: (2) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
core.init: (7) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (7) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
protocols.jd2.PDBJobInputter: (3) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (1) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (2) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (3) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (1) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (2) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (7) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (7) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (7) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.jd2.PDBJobInputter: (2) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.jd2.PDBJobInputter: (1) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.jd2.PDBJobInputter: (3) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (7) Evaluation Creator active ... 
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (2) Evaluation Creator active ... 
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (1) Evaluation Creator active ... 
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (3) Evaluation Creator active ... 
core.init: (6) 'RNG device' seed mode, using '/dev/urandom', seed=1379455488 seed_offset=0 real_seed=-1969830124
core.init.random: (6) RandomGenerator:init: Normal mode, seed=-1969830124 RG_type=mt19937
core.init: (6) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (6) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
protocols.jd2.PDBJobInputter: (6) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (6) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (6) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
basic.io.database: (2) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: (1) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: (7) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: (3) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (6) Evaluation Creator active ... 
basic.io.database: (6) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: (7) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (3) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (2) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (1) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (7) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (3) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (2) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (1) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (6) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (6) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (7) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (3) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (1) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (2) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (6) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (7) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
basic.io.database: (3) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
core.init: (5) Rosetta version exported  from http://www.rosettacommons.org
basic.io.database: (1) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
core.init: (5) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
basic.io.database: (2) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
basic.io.database: (6) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
core.init: (4) Rosetta version exported  from http://www.rosettacommons.org
core.init: (4) command: FloppyTail.mpi.linuxgccrelease -in:file:s p53MDM2added2aaCterminal_0001_0149.pdb -in:file:movemap mapmover -FloppyTail::perturb_temp 0.8 -FloppyTail::perturb_cycles 100 -FloppyTail::refine_temp 0.8 -FloppyTail::refine_cycles 100 -FloppyTail::refine_repack_cycles 30 -use_input_sc -ex1 -ex2 -out:pdb -resfile resfile2 -nstruct 8
core.init: (4) 'RNG device' seed mode, using '/dev/urandom', seed=1358293680 seed_offset=0 real_seed=-1969830126
core.init.random: (4) RandomGenerator:init: Normal mode, seed=-1969830126 RG_type=mt19937
core.init: (4) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (4) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
protocols.jd2.PDBJobInputter: (4) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (4) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (4) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (4) Evaluation Creator active ... 
basic.io.database: (4) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: (4) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (4) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (4) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
core.init: (5) 'RNG device' seed mode, using '/dev/urandom', seed=649450280 seed_offset=0 real_seed=-1969830125
core.init.random: (5) RandomGenerator:init: Normal mode, seed=-1969830125 RG_type=mt19937
core.init: (5) Resolved executable path: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/source/build/src/release/linux/3.19/64/x86/gcc/4.8/mpi/FloppyTail.mpi.linuxgccrelease
core.init: (5) Looking for database based on location of executable: /home/simu/Documents/rosetta_bin_linux_2015.38.58158_bundle/main/database/
protocols.jd2.PDBJobInputter: (5) Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: (5) PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: (5) pushed p53MDM2added2aaCterminal_0001_0149.pdb nstruct indices 1 - 8
protocols.evaluation.ChiWellRmsdEvaluatorCreator: (5) Evaluation Creator active ... 
basic.io.database: (5) Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: (5) Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: (5) Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: (5) Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: (5) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
basic.io.database: (4) Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
basic.io.database: (0) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
basic.io.database: (0) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (0) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
protocols.floppy_tail.FloppyTail: (0) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_no_dis_dep_die: false
basic.io.database: (3) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (0) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (0) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (0) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (0) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (0) SCOREFUNCTION: talaris2013
basic.io.database: (3) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (3) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
basic.io.database: (1) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
protocols.floppy_tail.FloppyTail: (3) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (3) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (3) SCOREFUNCTION: talaris2013
basic.io.database: (1) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (2) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
basic.io.database: (1) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
core.scoring.etable: (0) Starting energy table calculation
core.scoring.etable: (0) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (0) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (0) smooth_etable: spline smoothing solvation etables (max_dis = 6)
basic.io.database: (2) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (2) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
basic.io.database: (7) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
protocols.floppy_tail.FloppyTail: (1) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (1) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (1) SCOREFUNCTION: talaris2013
core.scoring.etable: (3) Starting energy table calculation
basic.io.database: (7) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (7) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
core.scoring.etable: (3) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (3) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (3) smooth_etable: spline smoothing solvation etables (max_dis = 6)
basic.io.database: (5) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
protocols.floppy_tail.FloppyTail: (2) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (2) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (2) SCOREFUNCTION: talaris2013
basic.io.database: (5) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (5) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
basic.io.database: (4) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
protocols.floppy_tail.FloppyTail: (7) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (7) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (7) SCOREFUNCTION: talaris2013
core.scoring.etable: (1) Starting energy table calculation
core.scoring.etable: (1) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (1) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (1) smooth_etable: spline smoothing solvation etables (max_dis = 6)
basic.io.database: (4) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (4) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
core.scoring.etable: (2) Starting energy table calculation
protocols.floppy_tail.FloppyTail: (5) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (5) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (5) SCOREFUNCTION: talaris2013
core.scoring.etable: (2) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (2) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (2) smooth_etable: spline smoothing solvation etables (max_dis = 6)
basic.io.database: (6) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv
core.scoring.etable: (7) Starting energy table calculation
protocols.floppy_tail.FloppyTail: (4) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (4) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
core.scoring.etable: (7) smooth_etable: changing atr/rep split to bottom of energy well
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
core.scoring.etable: (7) smooth_etable: spline smoothing lj etables (maxdis = 6)
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (4) SCOREFUNCTION: talaris2013
core.scoring.etable: (7) smooth_etable: spline smoothing solvation etables (max_dis = 6)
basic.io.database: (6) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv
basic.io.database: (6) Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv
core.scoring.etable: (5) Starting energy table calculation
core.scoring.etable: (5) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (5) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (5) smooth_etable: spline smoothing solvation etables (max_dis = 6)
protocols.floppy_tail.FloppyTail: (6) Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (6) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (6) SCOREFUNCTION: talaris2013
core.scoring.etable: (4) Starting energy table calculation
core.scoring.etable: (4) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (4) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (4) smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: (6) Starting energy table calculation
core.scoring.etable: (6) smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: (6) smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: (6) smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: (0) Finished calculating energy tables.
basic.io.database: (0) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (0) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
core.scoring.etable: (3) Finished calculating energy tables.
basic.io.database: (3) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (3) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (0) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
basic.io.database: (3) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: (1) Finished calculating energy tables.
basic.io.database: (1) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (1) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (1) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: (2) Finished calculating energy tables.
basic.io.database: (2) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (2) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (2) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: (7) Finished calculating energy tables.
basic.io.database: (7) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (7) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (7) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: (5) Finished calculating energy tables.
basic.io.database: (5) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (5) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (5) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: (4) Finished calculating energy tables.
basic.io.database: (4) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (4) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (4) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
core.scoring.etable: (6) Finished calculating energy tables.
basic.io.database: (6) Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: (6) Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: (6) Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
protocols.floppy_tail.FloppyTail: (0) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (0) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (0) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (0) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (0) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (0) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (0) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (0) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 1 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.floppy_tail.FloppyTail: (5) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (5) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (5) Slave Node 5: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 5 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 1 to node 5 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (5) Slave Node 5: Received job id 1 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 2 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (5) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (5) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
protocols.floppy_tail.FloppyTail: (2) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (2) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (2) Slave Node 2: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 2 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 2 to node 2 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (2) Slave Node 2: Received job id 2 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 3 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (2) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (2) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
protocols.floppy_tail.FloppyTail: (1) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (1) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (1) Slave Node 1: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 1 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 3 to node 1 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (1) Slave Node 1: Received job id 3 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 4 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (1) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (1) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
protocols.floppy_tail.FloppyTail: (7) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (7) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (7) Slave Node 7: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 7 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 4 to node 7 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (7) Slave Node 7: Received job id 4 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 5 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (7) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (7) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
protocols.floppy_tail.FloppyTail: (3) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (3) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (3) Slave Node 3: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 3 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 5 to node 3 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (3) Slave Node 3: Received job id 5 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 6 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (3) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (3) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
protocols.floppy_tail.FloppyTail: (4) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (4) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (4) Slave Node 4: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 4 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 6 to node 4 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (4) Slave Node 4: Received job id 6 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 7 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (4) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (4) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
protocols.floppy_tail.FloppyTail: (6) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (6) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.jd2.MPIWorkPoolJobDistributor: (6) Slave Node 6: Requesting new job id from master
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Received message from 6 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Sending new job id 7 to node 6 with tag 10
protocols.jd2.MPIWorkPoolJobDistributor: (6) Slave Node 6: Received job id 7 from master.
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Getting next job to assign from list id 8 of 8
protocols.jd2.MPIWorkPoolJobDistributor: (0) Master Node: Waiting for job requests...
protocols.jd2.PDBJobInputter: (6) PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: (6) filling pose from PDB p53MDM2added2aaCterminal_0001_0149.pdb
core.chemical.ResidueTypeSet: (5) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (5) Total time to initialize 0.957962 seconds.
core.chemical.ResidueTypeSet: (2) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (2) Total time to initialize 0.990593 seconds.
core.chemical.ResidueTypeSet: (7) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (7) Total time to initialize 0.991749 seconds.
core.chemical.ResidueTypeSet: (4) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (4) Total time to initialize 1.02228 seconds.
core.chemical.ResidueTypeSet: (1) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (1) Total time to initialize 1.03729 seconds.
core.chemical.ResidueTypeSet: (6) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (6) Total time to initialize 0.969545 seconds.
protocols.floppy_tail.FloppyTail: (5) 
Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (5) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (5) SCOREFUNCTION: talaris2013
protocols.floppy_tail.FloppyTail: (5) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (5) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (5) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (5) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (5) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (5) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (5) 
IGNC will compare group 1-100 with 96-100
protocols.floppy_tail.FloppyTail: (5) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (5) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (5) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (5) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (5) entering perturb steps
protocols.floppy_tail.FloppyTail: (2) 
Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (7) 
Using centroid scorefunction
ScoreFunction::show():
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: smooth_hb_env_dep: true
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (2) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_hbond: 0
core.scoring.ScoreFunctionFactory: (2) SCOREFUNCTION: talaris2013
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (7) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (2) 
Using fullatom scorefunction
ScoreFunction::show():
core.scoring.ScoreFunctionFactory: (7) SCOREFUNCTION: talaris2013
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (7) 
Using fullatom scorefunction
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_bound_tag: bound
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (2) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_protein_: true
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: put_intra_into_total_: false
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (2) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (2) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (2) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (2) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (7) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (7) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (7) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (7) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (2) 
IGNC will compare group 1-100 with 96-100
protocols.floppy_tail.FloppyTail: (7) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (7) 
IGNC will compare group 1-100 with 96-100
core.chemical.ResidueTypeSet: (5) Finished initializing centroid residue type set.  Created 1834 residue types
core.chemical.ResidueTypeSet: (5) Total time to initialize 0.044402 seconds.
protocols.floppy_tail.FloppyTail: (2) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (2) 
1***********************************************************************************C1*************C
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protocols.floppy_tail.FloppyTail: (2) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (2) 
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protocols.floppy_tail.FloppyTail: (7) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (7) 
protocols.floppy_tail.FloppyTail: (2) entering perturb steps
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protocols.floppy_tail.FloppyTail: (7) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (7) 
1***********************************************************************************C1*************C
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protocols.floppy_tail.FloppyTail: (7) entering perturb steps
core.chemical.ResidueTypeSet: (3) Finished initializing fa_standard residue type set.  Created 36572 residue types
core.chemical.ResidueTypeSet: (3) Total time to initialize 0.983353 seconds.
protocols.floppy_tail.FloppyTail: (4) 
Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
core.chemical.ResidueTypeSet: (7) Finished initializing centroid residue type set.  Created 1834 residue types
core.chemical.ResidueTypeSet: (7) Total time to initialize 0.042714 seconds.
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (4) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
core.chemical.ResidueTypeSet: (2) Finished initializing centroid residue type set.  Created 1834 residue types
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.chemical.ResidueTypeSet: (2) Total time to initialize 0.042971 seconds.
core.scoring.ScoreFunctionFactory: (4) SCOREFUNCTION: talaris2013
protocols.floppy_tail.FloppyTail: (4) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (4) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (4) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (4) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (4) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (4) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (4) 
IGNC will compare group 1-100 with 96-100
protocols.floppy_tail.FloppyTail: (4) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (4) 
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protocols.floppy_tail.FloppyTail: (4) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (4) 
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protocols.floppy_tail.FloppyTail: (4) entering perturb steps
protocols.floppy_tail.FloppyTail: (1) 
Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (1) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (1) SCOREFUNCTION: talaris2013
protocols.floppy_tail.FloppyTail: (1) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (1) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (1) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (1) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (1) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (1) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (1) 
IGNC will compare group 1-100 with 96-100
protocols.floppy_tail.FloppyTail: (1) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (1) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (1) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (1) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (1) entering perturb steps
protocols.floppy_tail.FloppyTail: (5) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (5) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (5) shear on at 33
protocols.floppy_tail.FloppyTail: (5)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (5) 1  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (5) 2  -61.0907  -62.5233
protocols.floppy_tail.FloppyTail: (5) 3  -61.3207  -62.5233
protocols.floppy_tail.FloppyTail: (5) 4  -61.3207  -62.5233
protocols.floppy_tail.FloppyTail: (6) 
Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (6) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (6) SCOREFUNCTION: talaris2013
protocols.floppy_tail.FloppyTail: (5) 5  -61.3207  -62.5233
protocols.floppy_tail.FloppyTail: (6) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (6) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (6) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (6) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (6) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (6) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (6) 
IGNC will compare group 1-100 with 96-100
protocols.floppy_tail.FloppyTail: (5) 6  -61.2646  -62.5233
protocols.floppy_tail.FloppyTail: (6) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (6) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (6) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (6) 
1***********************************************************************************C1*************C
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protocols.floppy_tail.FloppyTail: (6) entering perturb steps
protocols.floppy_tail.FloppyTail: (5) 7  -62.1683  -62.5233
protocols.floppy_tail.FloppyTail: (5) 8  -62.1683  -62.5233
protocols.floppy_tail.FloppyTail: (5) 9  -62.1683  -62.5233
protocols.floppy_tail.FloppyTail: (5) 10  -61.1472  -62.5233
protocols.floppy_tail.FloppyTail: (5) 11  -61.1472  -62.5233
protocols.floppy_tail.FloppyTail: (5) 12  -61.1472  -62.5233
protocols.floppy_tail.FloppyTail: (5) 13  -61.1868  -62.5233
protocols.floppy_tail.FloppyTail: (5) 14  -61.1868  -62.5233
protocols.floppy_tail.FloppyTail: (5) 15  -60.9583  -62.5233
core.chemical.ResidueTypeSet: (4) Finished initializing centroid residue type set.  Created 1834 residue types
core.chemical.ResidueTypeSet: (4) Total time to initialize 0.047404 seconds.
protocols.floppy_tail.FloppyTail: (5) 16  -61.1139  -62.5233
protocols.floppy_tail.FloppyTail: (5) 17  -61.1139  -62.5233
core.chemical.ResidueTypeSet: (1) Finished initializing centroid residue type set.  Created 1834 residue types
core.chemical.ResidueTypeSet: (1) Total time to initialize 0.047282 seconds.
protocols.floppy_tail.FloppyTail: (5) 18  -61.1139  -62.5233
protocols.floppy_tail.FloppyTail: (5) 19  -60.0547  -62.5233
protocols.floppy_tail.FloppyTail: (2) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (7) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (2) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (7) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (7) shear on at 33
protocols.floppy_tail.FloppyTail: (7)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (2) shear on at 33
protocols.floppy_tail.FloppyTail: (2)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (2) 1  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (7) 1  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (2) 2  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (7) 2  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (2) 3  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (7) 3  -62.4783  -62.5233
protocols.floppy_tail.FloppyTail: (7) 4  -62.4783  -62.5233
protocols.floppy_tail.FloppyTail: (2) 4  -62.5233  -62.5233
core.chemical.ResidueTypeSet: (6) Finished initializing centroid residue type set.  Created 1834 residue types
core.chemical.ResidueTypeSet: (6) Total time to initialize 0.044086 seconds.
protocols.floppy_tail.FloppyTail: (7) 5  -61.3727  -62.5233
protocols.floppy_tail.FloppyTail: (2) 5  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (7) 6  -61.3727  -62.5233
protocols.floppy_tail.FloppyTail: (2) 6  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (5) 20  -61.1812  -62.5233
protocols.floppy_tail.FloppyTail: (2) 7  -61.4262  -62.5233
protocols.floppy_tail.FloppyTail: (5) 21  -60.8813  -62.5233
protocols.floppy_tail.FloppyTail: (7) 7  -61.3727  -62.5233
protocols.floppy_tail.FloppyTail: (2) 8  -61.7954  -62.5233
protocols.floppy_tail.FloppyTail: (7) 8  -61.3727  -62.5233
protocols.floppy_tail.FloppyTail: (5) 22  -62.6238  -62.6238
protocols.floppy_tail.FloppyTail: (2) 9  -61.1919  -62.5233
protocols.floppy_tail.FloppyTail: (7) 9  -60.8957  -62.5233
protocols.floppy_tail.FloppyTail: (5) 23  -62.6238  -62.6238
protocols.floppy_tail.FloppyTail: (2) 10  -61.1919  -62.5233
protocols.floppy_tail.FloppyTail: (7) 10  -60.8957  -62.5233
protocols.floppy_tail.FloppyTail: (5) 24  -62.6238  -62.6238
protocols.floppy_tail.FloppyTail: (7) 11  -60.9684  -62.5233
protocols.floppy_tail.FloppyTail: (2) 11  -61.1919  -62.5233
protocols.floppy_tail.FloppyTail: (5) 25  -62.6238  -62.6238
protocols.floppy_tail.FloppyTail: (2) 12  -61.1919  -62.5233
protocols.floppy_tail.FloppyTail: (7) 12  -60.9295  -62.5233
protocols.floppy_tail.FloppyTail: (5) 26  -62.0132  -62.6238
protocols.floppy_tail.FloppyTail: (2) 13  -61.1964  -62.5233
protocols.floppy_tail.FloppyTail: (7) 13  -59.8502  -62.5233
protocols.floppy_tail.FloppyTail: (5) 27  -62.0132  -62.6238
protocols.floppy_tail.FloppyTail: (2) 14  -61.1343  -62.5233
protocols.floppy_tail.FloppyTail: (7) 14  -59.8502  -62.5233
protocols.floppy_tail.FloppyTail: (5) 28  -63.8105  -63.8105
protocols.floppy_tail.FloppyTail: (2) 15  -61.7461  -62.5233
protocols.floppy_tail.FloppyTail: (7) 15  -61.1488  -62.5233
protocols.floppy_tail.FloppyTail: (5) 29  -63.8105  -63.8105
protocols.floppy_tail.FloppyTail: (2) 16  -61.7461  -62.5233
protocols.floppy_tail.FloppyTail: (7) 16  -61.1488  -62.5233
protocols.floppy_tail.FloppyTail: (2) 17  -62.1651  -62.5233
protocols.floppy_tail.FloppyTail: (7) 17  -61.2216  -62.5233
protocols.floppy_tail.FloppyTail: (5) 30  -63.8269  -63.8269
protocols.floppy_tail.FloppyTail: (7) 18  -61.0711  -62.5233
protocols.floppy_tail.FloppyTail: (2) 18  -61.6033  -62.5233
protocols.floppy_tail.FloppyTail: (5) 31  -63.9062  -63.9062
protocols.floppy_tail.FloppyTail: (7) 19  -60.9773  -62.5233
protocols.floppy_tail.FloppyTail: (2) 19  -62.5449  -62.5449
protocols.floppy_tail.FloppyTail: (5) 32  -63.9953  -63.9953
protocols.floppy_tail.FloppyTail: (5) 33  -63.6685  -63.9953
protocols.floppy_tail.FloppyTail: (5) 34  -63.6685  -63.9953
protocols.floppy_tail.FloppyTail: (5) 35  -63.7725  -63.9953
protocols.floppy_tail.FloppyTail: (5) 36  -63.7725  -63.9953
protocols.floppy_tail.FloppyTail: (5) 37  -63.7725  -63.9953
protocols.floppy_tail.FloppyTail: (5) 38  -63.6261  -63.9953
protocols.floppy_tail.FloppyTail: (5) 39  -63.3898  -63.9953
protocols.floppy_tail.FloppyTail: (2) 20  -62.5978  -62.5978
protocols.floppy_tail.FloppyTail: (4) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (2) 21  -63.5574  -63.5574
protocols.floppy_tail.FloppyTail: (3) 
Using centroid scorefunction
ScoreFunction::show():
weights: (vdw 1) (cenpack 1) (hbond_sr_bb 1) (hbond_lr_bb 1) (pair 1) (rama 1) (env 1) (cbeta 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (3) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_side_chain_bonus: -0.5
core.scoring.ScoreFunctionFactory: (3) SCOREFUNCTION: talaris2013
protocols.floppy_tail.FloppyTail: (4) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (3) 
Using fullatom scorefunction
ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.75) (fa_intra_rep 0.004) (fa_elec 0.7) (pro_close 1) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_fa13 1) (rama 0.2) (omega 0.5) (fa_dun 0.56) (p_aa_pp 0.32) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 1
EnergyMethodOptions::show: method_weights: ref 0.592942 0.354993 -1.28682 -1.55374 0.43057 0.140526 0.357498 0.831803 -0.287374 0.602328 0.158677 -0.94198 -0.219285 -1.17797 -0.14916 0.176583 0.16454 0.744844 0.92933 0.131696
EnergyMethodOptions::show: method_weights: free_res
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_label_type: SPLIT_UNFOLDED_MM
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: split_unfolded_value_type: SPLIT_UNFOLDED_BOLTZ
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_protein_protein_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_monomer_fa_elec: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_max_dis: 5.5
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_min_dis: 1.6
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_die: 10
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_no_dis_dep_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_die: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D: 78
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_D0: 2
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_sigmoidal_S: 0.36
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: smooth_fa_elec: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_type: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param1: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_param2: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_fade_hbond: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grp_cpfxn: 1
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: elec_group_file: /scoring/score_functions/elec_group_def.dat
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: grpelec_context_dependent: 0
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_polarization: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: use_gen_kirkwood: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: exclude_intra_res_protein: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: put_intra_into_total: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_interres_path_distance_cutoff: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: geom_sol_intrares_path_distance_cutoff: true
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: envsmooth_zero_negatives: false
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_bound_tag: bound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: pb_unbound_tag: unbound
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.floppy_tail.FloppyTail: (3) EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_DNA_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_protein_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_intra_res_RNA_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: put_intra_into_total_: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: exclude_self_hbonds: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_hb_env_dep_DNA: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: smooth_hb_env_dep: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: bb_donor_acceptor_check: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: params_database_tag_: sp2_elec_params
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: use_sp2_chi_penalty_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: sp2_outer_width_: 0.357
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: measure_sp3acc_BAH_from_hvy_: true
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: fade_energy_: 1
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: Mbhbond: false 
protocols.floppy_tail.FloppyTail: (3) HbondOptions::show: mphbond: false
protocols.floppy_tail.FloppyTail: (3) HBondOptions::show: hbond_energy_shift: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: syn_G_potential_bonus: 0
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: torsion_potential: ps_04282011
protocols.floppy_tail.FloppyTail: (3) RNA_EnergyMethodOptions::show: suiteness_bonus: Richardson
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_suite_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_2HOprime_bonus: -0.5
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_sugar_bonus: -1
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: pack_phosphate_penalty: 0.25
protocols.floppy_tail.FloppyTail: (3) FreeDOF_Options::show: free_side_chain_bonus: -0.5
protocols.floppy_tail.FloppyTail: (3) 
IGNC will compare group 1-100 with 96-100
protocols.floppy_tail.FloppyTail: (2) 22  -65.1707  -65.1707
protocols.floppy_tail.FloppyTail: (1) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (4) shear on at 33
protocols.floppy_tail.FloppyTail: (4)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (7) 20  -62.5524  -62.5524
protocols.floppy_tail.FloppyTail: (2) 23  -65.1707  -65.1707
protocols.floppy_tail.FloppyTail: (3) foldtree, movemap: 
protocols.floppy_tail.FloppyTail: (3) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (3) foldtree, movemap for first part of refine: 
protocols.floppy_tail.FloppyTail: (3) 
1***********************************************************************************C1*************C
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx*****
protocols.floppy_tail.FloppyTail: (3) entering perturb steps
protocols.floppy_tail.FloppyTail: (1) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (7) 21  -62.5524  -62.5524
protocols.floppy_tail.FloppyTail: (2) 24  -65.1707  -65.1707
protocols.floppy_tail.FloppyTail: (4) 1  -61.6327  -62.5233
protocols.floppy_tail.FloppyTail: (5) 40  -63.3992  -63.9953
protocols.floppy_tail.FloppyTail: (2) 25  -65.1707  -65.1707
protocols.floppy_tail.FloppyTail: (7) 22  -63.6195  -63.6195
protocols.floppy_tail.FloppyTail: (5) 41  -63.3992  -63.9953
protocols.floppy_tail.FloppyTail: (4) 2  -61.6327  -62.5233
protocols.floppy_tail.FloppyTail: (1) shear on at 33
protocols.floppy_tail.FloppyTail: (1)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (2) 26  -65.1707  -65.1707
protocols.floppy_tail.FloppyTail: (7) 23  -63.6195  -63.6195
protocols.floppy_tail.FloppyTail: (5) 42  -63.389  -63.9953
protocols.floppy_tail.FloppyTail: (4) 3  -61.6327  -62.5233
protocols.floppy_tail.FloppyTail: (2) 27  -65.1707  -65.1707
protocols.floppy_tail.FloppyTail: (1) 1  -61.1734  -62.5233
protocols.floppy_tail.FloppyTail: (6) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (5) 43  -63.4747  -63.9953
protocols.floppy_tail.FloppyTail: (7) 24  -65.5591  -65.5591
protocols.floppy_tail.FloppyTail: (6) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (4) 4  -61.6327  -62.5233
protocols.floppy_tail.FloppyTail: (2) 28  -65.4085  -65.4085
protocols.floppy_tail.FloppyTail: (5) 44  -63.4747  -63.9953
protocols.floppy_tail.FloppyTail: (7) 25  -65.5591  -65.5591
protocols.floppy_tail.FloppyTail: (1) 2  -63.5872  -63.5872
protocols.floppy_tail.FloppyTail: (5) 45  -63.4747  -63.9953
protocols.floppy_tail.FloppyTail: (6) shear on at 33
protocols.floppy_tail.FloppyTail: (6)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (7) 26  -65.5591  -65.5591
protocols.floppy_tail.FloppyTail: (4) 5  -61.6327  -62.5233
protocols.floppy_tail.FloppyTail: (2) 29  -66.4699  -66.4699
protocols.floppy_tail.FloppyTail: (5) 46  -63.4518  -63.9953
protocols.floppy_tail.FloppyTail: (6) 1  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (1) 3  -63.5872  -63.5872
protocols.floppy_tail.FloppyTail: (2) 30  -66.4699  -66.4699
protocols.floppy_tail.FloppyTail: (7) 27  -65.5591  -65.5591
protocols.floppy_tail.FloppyTail: (6) 2  -61.6247  -62.5233
protocols.floppy_tail.FloppyTail: (5) 47  -63.4872  -63.9953
protocols.floppy_tail.FloppyTail: (4) 6  -63.3287  -63.3287
protocols.floppy_tail.FloppyTail: (7) 28  -65.5591  -65.5591
protocols.floppy_tail.FloppyTail: (1) 4  -63.5872  -63.5872
protocols.floppy_tail.FloppyTail: (2) 31  -68.4036  -68.4036
protocols.floppy_tail.FloppyTail: (6) 3  -61.6247  -62.5233
protocols.floppy_tail.FloppyTail: (5) 48  -63.4318  -63.9953
protocols.floppy_tail.FloppyTail: (2) 32  -68.1916  -68.4036
protocols.floppy_tail.FloppyTail: (7) 29  -65.7663  -65.7663
protocols.floppy_tail.FloppyTail: (4) 7  -62.8539  -63.3287
protocols.floppy_tail.FloppyTail: (6) 4  -61.6247  -62.5233
protocols.floppy_tail.FloppyTail: (5) 49  -66.1991  -66.1991
protocols.floppy_tail.FloppyTail: (1) 5  -64.5195  -64.5195
protocols.floppy_tail.FloppyTail: (7) 30  -65.7663  -65.7663
protocols.floppy_tail.FloppyTail: (2) 33  -68.1916  -68.4036
protocols.floppy_tail.FloppyTail: (4) 8  -62.8539  -63.3287
protocols.floppy_tail.FloppyTail: (5) 50  -66.1991  -66.1991
protocols.floppy_tail.FloppyTail: (6) 5  -63.0373  -63.0373
protocols.floppy_tail.FloppyTail: (1) 6  -64.5195  -64.5195
protocols.floppy_tail.FloppyTail: (2) 34  -67.9539  -68.4036
protocols.floppy_tail.FloppyTail: (7) 31  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (6) 6  -63.0373  -63.0373
protocols.floppy_tail.FloppyTail: (5) 51  -65.7939  -66.1991
protocols.floppy_tail.FloppyTail: (4) 9  -62.8172  -63.3287
protocols.floppy_tail.FloppyTail: (2) 35  -67.9539  -68.4036
protocols.floppy_tail.FloppyTail: (7) 32  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (1) 7  -64.5195  -64.5195
protocols.floppy_tail.FloppyTail: (5) 52  -65.4097  -66.1991
protocols.floppy_tail.FloppyTail: (6) 7  -62.3814  -63.0373
protocols.floppy_tail.FloppyTail: (2) 36  -67.9539  -68.4036
protocols.floppy_tail.FloppyTail: (4) 10  -62.824  -63.3287
protocols.floppy_tail.FloppyTail: (7) 33  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (6) 8  -62.3814  -63.0373
protocols.floppy_tail.FloppyTail: (5) 53  -65.4097  -66.1991
protocols.floppy_tail.FloppyTail: (2) 37  -68.3958  -68.4036
protocols.floppy_tail.FloppyTail: (1) 8  -64.8501  -64.8501
protocols.floppy_tail.FloppyTail: (7) 34  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (6) 9  -62.3814  -63.0373
protocols.floppy_tail.FloppyTail: (5) 54  -65.477  -66.1991
protocols.floppy_tail.FloppyTail: (4) 11  -62.1551  -63.3287
protocols.floppy_tail.FloppyTail: (2) 38  -68.1769  -68.4036
protocols.floppy_tail.FloppyTail: (7) 35  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (5) 55  -65.9157  -66.1991
protocols.floppy_tail.FloppyTail: (1) 9  -64.8501  -64.8501
protocols.floppy_tail.FloppyTail: (4) 12  -62.9517  -63.3287
protocols.floppy_tail.FloppyTail: (2) 39  -68.5107  -68.5107
protocols.floppy_tail.FloppyTail: (6) 10  -64.9834  -64.9834
protocols.floppy_tail.FloppyTail: (7) 36  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (5) 56  -65.9157  -66.1991
protocols.floppy_tail.FloppyTail: (1) 10  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (7) 37  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (6) 11  -64.9834  -64.9834
protocols.floppy_tail.FloppyTail: (5) 57  -65.7766  -66.1991
protocols.floppy_tail.FloppyTail: (4) 13  -64.7135  -64.7135
protocols.floppy_tail.FloppyTail: (6) 12  -64.9834  -64.9834
protocols.floppy_tail.FloppyTail: (7) 38  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (1) 11  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (5) 58  -65.6567  -66.1991
protocols.floppy_tail.FloppyTail: (4) 14  -63.8451  -64.7135
protocols.floppy_tail.FloppyTail: (6) 13  -64.9834  -64.9834
protocols.floppy_tail.FloppyTail: (7) 39  -68.4352  -68.4352
protocols.floppy_tail.FloppyTail: (5) 59  -65.6567  -66.1991
protocols.floppy_tail.FloppyTail: (1) 12  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (6) 14  -64.7334  -64.9834
protocols.floppy_tail.FloppyTail: (4) 15  -63.8451  -64.7135
protocols.floppy_tail.FloppyTail: (6) 15  -64.7334  -64.9834
protocols.floppy_tail.FloppyTail: (1) 13  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (4) 16  -63.9864  -64.7135
protocols.floppy_tail.FloppyTail: (6) 16  -64.7334  -64.9834
protocols.floppy_tail.FloppyTail: (1) 14  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (6) 17  -64.7334  -64.9834
protocols.floppy_tail.FloppyTail: (4) 17  -63.9864  -64.7135
protocols.floppy_tail.FloppyTail: (2) 40  -68.5117  -68.5117
protocols.floppy_tail.FloppyTail: (1) 15  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (6) 18  -64.7334  -64.9834
protocols.floppy_tail.FloppyTail: (2) 41  -68.3914  -68.5117
protocols.floppy_tail.FloppyTail: (4) 18  -63.9864  -64.7135
core.chemical.ResidueTypeSet: (3) Finished initializing centroid residue type set.  Created 1834 residue types
core.chemical.ResidueTypeSet: (3) Total time to initialize 0.052467 seconds.
protocols.floppy_tail.FloppyTail: (1) 16  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (6) 19  -64.7334  -64.9834
protocols.floppy_tail.FloppyTail: (2) 42  -68.3914  -68.5117
protocols.floppy_tail.FloppyTail: (4) 19  -62.8677  -64.7135
protocols.floppy_tail.FloppyTail: (1) 17  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (5) 60  -66.1029  -66.1991
protocols.floppy_tail.FloppyTail: (2) 43  -68.495  -68.5117
protocols.floppy_tail.FloppyTail: (7) 40  -68.6385  -68.6385
protocols.floppy_tail.FloppyTail: (5) 61  -65.3134  -66.1991
protocols.floppy_tail.FloppyTail: (2) 44  -68.495  -68.5117
protocols.floppy_tail.FloppyTail: (1) 18  -64.8465  -64.8501
protocols.floppy_tail.FloppyTail: (7) 41  -68.9033  -68.9033
protocols.floppy_tail.FloppyTail: (5) 62  -65.3134  -66.1991
protocols.floppy_tail.FloppyTail: (2) 45  -68.495  -68.5117
protocols.floppy_tail.FloppyTail: (1) 19  -64.8406  -64.8501
protocols.floppy_tail.FloppyTail: (7) 42  -68.9033  -68.9033
protocols.floppy_tail.FloppyTail: (5) 63  -65.2274  -66.1991
protocols.floppy_tail.FloppyTail: (2) 46  -68.495  -68.5117
protocols.floppy_tail.FloppyTail: (7) 43  -68.9033  -68.9033
protocols.floppy_tail.FloppyTail: (5) 64  -65.2274  -66.1991
protocols.floppy_tail.FloppyTail: (2) 47  -68.495  -68.5117
protocols.floppy_tail.FloppyTail: (7) 44  -68.9033  -68.9033
protocols.floppy_tail.FloppyTail: (2) 48  -68.3512  -68.5117
protocols.floppy_tail.FloppyTail: (5) 65  -65.2274  -66.1991
protocols.floppy_tail.FloppyTail: (6) 20  -64.7722  -64.9834
protocols.floppy_tail.FloppyTail: (7) 45  -68.9033  -68.9033
protocols.floppy_tail.FloppyTail: (5) 66  -65.5171  -66.1991
protocols.floppy_tail.FloppyTail: (2) 49  -68.3512  -68.5117
protocols.floppy_tail.FloppyTail: (6) 21  -64.7722  -64.9834
protocols.floppy_tail.FloppyTail: (7) 46  -68.6103  -68.9033
protocols.floppy_tail.FloppyTail: (5) 67  -65.5171  -66.1991
protocols.floppy_tail.FloppyTail: (2) 50  -68.8728  -68.8728
protocols.floppy_tail.FloppyTail: (6) 22  -65.6956  -65.6956
protocols.floppy_tail.FloppyTail: (7) 47  -68.6103  -68.9033
protocols.floppy_tail.FloppyTail: (5) 68  -65.5171  -66.1991
protocols.floppy_tail.FloppyTail: (2) 51  -68.8728  -68.8728
protocols.floppy_tail.FloppyTail: (6) 23  -65.6956  -65.6956
protocols.floppy_tail.FloppyTail: (7) 48  -68.6103  -68.9033
protocols.floppy_tail.FloppyTail: (5) 69  -64.9587  -66.1991
protocols.floppy_tail.FloppyTail: (2) 52  -68.4473  -68.8728
protocols.floppy_tail.FloppyTail: (6) 24  -65.6956  -65.6956
protocols.floppy_tail.FloppyTail: (5) 70  -64.9587  -66.1991
protocols.floppy_tail.FloppyTail: (2) 53  -68.4473  -68.8728
protocols.floppy_tail.FloppyTail: (7) 49  -69.0613  -69.0613
protocols.floppy_tail.FloppyTail: (5) 71  -65.4586  -66.1991
protocols.floppy_tail.FloppyTail: (6) 25  -66.5721  -66.5721
protocols.floppy_tail.FloppyTail: (2) 54  -68.4767  -68.8728
protocols.floppy_tail.FloppyTail: (7) 50  -69.0613  -69.0613
protocols.floppy_tail.FloppyTail: (5) 72  -63.7468  -66.1991
protocols.floppy_tail.FloppyTail: (6) 26  -66.5721  -66.5721
protocols.floppy_tail.FloppyTail: (2) 55  -67.9454  -68.8728
protocols.floppy_tail.FloppyTail: (7) 51  -68.996  -69.0613
protocols.floppy_tail.FloppyTail: (5) 73  -63.7468  -66.1991
protocols.floppy_tail.FloppyTail: (6) 27  -66.5721  -66.5721
protocols.floppy_tail.FloppyTail: (2) 56  -66.7357  -68.8728
protocols.floppy_tail.FloppyTail: (7) 52  -68.996  -69.0613
protocols.floppy_tail.FloppyTail: (5) 74  -63.7468  -66.1991
protocols.floppy_tail.FloppyTail: (6) 28  -66.5721  -66.5721
protocols.floppy_tail.FloppyTail: (2) 57  -66.7357  -68.8728
protocols.floppy_tail.FloppyTail: (7) 53  -68.996  -69.0613
protocols.floppy_tail.FloppyTail: (5) 75  -63.0832  -66.1991
protocols.floppy_tail.FloppyTail: (6) 29  -66.3408  -66.5721
protocols.floppy_tail.FloppyTail: (2) 58  -66.7357  -68.8728
protocols.floppy_tail.FloppyTail: (4) 20  -64.3056  -64.7135
protocols.floppy_tail.FloppyTail: (7) 54  -69.0509  -69.0613
protocols.floppy_tail.FloppyTail: (5) 76  -63.3297  -66.1991
protocols.floppy_tail.FloppyTail: (6) 30  -66.3408  -66.5721
protocols.floppy_tail.FloppyTail: (2) 59  -66.9415  -68.8728
protocols.floppy_tail.FloppyTail: (7) 55  -69.0509  -69.0613
protocols.floppy_tail.FloppyTail: (4) 21  -63.3818  -64.7135
protocols.floppy_tail.FloppyTail: (6) 31  -66.1021  -66.5721
protocols.floppy_tail.FloppyTail: (5) 77  -62.8534  -66.1991
protocols.floppy_tail.FloppyTail: (7) 56  -68.8491  -69.0613
protocols.floppy_tail.FloppyTail: (4) 22  -63.5106  -64.7135
protocols.floppy_tail.FloppyTail: (6) 32  -66.1021  -66.5721
protocols.floppy_tail.FloppyTail: (5) 78  -62.8397  -66.1991
protocols.floppy_tail.FloppyTail: (7) 57  -68.8535  -69.0613
protocols.floppy_tail.FloppyTail: (6) 33  -66.3209  -66.5721
protocols.floppy_tail.FloppyTail: (5) 79  -62.8574  -66.1991
protocols.floppy_tail.FloppyTail: (4) 23  -63.4869  -64.7135
protocols.floppy_tail.FloppyTail: (7) 58  -68.8535  -69.0613
protocols.floppy_tail.FloppyTail: (1) 20  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (6) 34  -66.0991  -66.5721
protocols.floppy_tail.FloppyTail: (7) 59  -68.8535  -69.0613
protocols.floppy_tail.FloppyTail: (4) 24  -63.7589  -64.7135
protocols.floppy_tail.FloppyTail: (6) 35  -65.6976  -66.5721
protocols.floppy_tail.FloppyTail: (1) 21  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (6) 36  -65.6976  -66.5721
protocols.floppy_tail.FloppyTail: (4) 25  -63.7589  -64.7135
protocols.floppy_tail.FloppyTail: (1) 22  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (2) 60  -66.9433  -68.8728
protocols.floppy_tail.FloppyTail: (6) 37  -65.6976  -66.5721
protocols.floppy_tail.FloppyTail: (4) 26  -63.7589  -64.7135
protocols.floppy_tail.FloppyTail: (1) 23  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (2) 61  -67.2878  -68.8728
protocols.floppy_tail.FloppyTail: (6) 38  -65.6976  -66.5721
protocols.floppy_tail.FloppyTail: (4) 27  -63.7589  -64.7135
protocols.floppy_tail.FloppyTail: (6) 39  -65.6976  -66.5721
protocols.floppy_tail.FloppyTail: (2) 62  -67.2878  -68.8728
protocols.floppy_tail.FloppyTail: (1) 24  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (5) 80  -63.2706  -66.1991
protocols.floppy_tail.FloppyTail: (2) 63  -67.2878  -68.8728
protocols.floppy_tail.FloppyTail: (4) 28  -63.7589  -64.7135
protocols.floppy_tail.FloppyTail: (1) 25  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (5) 81  -62.7489  -66.1991
protocols.floppy_tail.FloppyTail: (2) 64  -67.4619  -68.8728
protocols.floppy_tail.FloppyTail: (5) 82  -62.7489  -66.1991
protocols.floppy_tail.FloppyTail: (7) 60  -69.0421  -69.0613
protocols.floppy_tail.FloppyTail: (4) 29  -64.8513  -64.8513
protocols.floppy_tail.FloppyTail: (1) 26  -65.272  -65.272
protocols.floppy_tail.FloppyTail: (2) 65  -67.3476  -68.8728
protocols.floppy_tail.FloppyTail: (5) 83  -62.7489  -66.1991
protocols.floppy_tail.FloppyTail: (2) 66  -67.3476  -68.8728
protocols.floppy_tail.FloppyTail: (7) 61  -69.5034  -69.5034
protocols.floppy_tail.FloppyTail: (4) 30  -64.8513  -64.8513
protocols.floppy_tail.FloppyTail: (1) 27  -64.8498  -65.272
protocols.floppy_tail.FloppyTail: (5) 84  -62.7489  -66.1991
protocols.floppy_tail.FloppyTail: (2) 67  -67.4068  -68.8728
protocols.floppy_tail.FloppyTail: (7) 62  -69.5034  -69.5034
protocols.floppy_tail.FloppyTail: (5) 85  -63.1807  -66.1991
protocols.floppy_tail.FloppyTail: (4) 31  -63.914  -64.8513
protocols.floppy_tail.FloppyTail: (1) 28  -64.8498  -65.272
protocols.floppy_tail.FloppyTail: (2) 68  -67.4068  -68.8728
protocols.floppy_tail.FloppyTail: (7) 63  -69.316  -69.5034
protocols.floppy_tail.FloppyTail: (5) 86  -63.1807  -66.1991
protocols.floppy_tail.FloppyTail: (2) 69  -67.4068  -68.8728
protocols.floppy_tail.FloppyTail: (7) 64  -69.0788  -69.5034
protocols.floppy_tail.FloppyTail: (4) 32  -64.4869  -64.8513
protocols.floppy_tail.FloppyTail: (1) 29  -64.8498  -65.272
protocols.floppy_tail.FloppyTail: (5) 87  -63.1807  -66.1991
protocols.floppy_tail.FloppyTail: (2) 70  -67.4068  -68.8728
protocols.floppy_tail.FloppyTail: (7) 65  -69.2252  -69.5034
protocols.floppy_tail.FloppyTail: (5) 88  -63.1807  -66.1991
protocols.floppy_tail.FloppyTail: (1) 30  -64.8498  -65.272
protocols.floppy_tail.FloppyTail: (4) 33  -64.4317  -64.8513
protocols.floppy_tail.FloppyTail: (2) 71  -67.8508  -68.8728
protocols.floppy_tail.FloppyTail: (7) 66  -69.2252  -69.5034
protocols.floppy_tail.FloppyTail: (6) 40  -67.3575  -67.3575
protocols.floppy_tail.FloppyTail: (5) 89  -63.1807  -66.1991
protocols.floppy_tail.FloppyTail: (2) 72  -67.2543  -68.8728
protocols.floppy_tail.FloppyTail: (4) 34  -64.4317  -64.8513
protocols.floppy_tail.FloppyTail: (7) 67  -69.2252  -69.5034
protocols.floppy_tail.FloppyTail: (1) 31  -64.8498  -65.272
protocols.floppy_tail.FloppyTail: (5) 90  -63.0476  -66.1991
protocols.floppy_tail.FloppyTail: (6) 41  -67.1076  -67.3575
protocols.floppy_tail.FloppyTail: (2) 73  -67.2543  -68.8728
protocols.floppy_tail.FloppyTail: (7) 68  -69.2252  -69.5034
protocols.floppy_tail.FloppyTail: (5) 91  -63.0476  -66.1991
protocols.floppy_tail.FloppyTail: (1) 32  -64.8498  -65.272
protocols.floppy_tail.FloppyTail: (4) 35  -64.4317  -64.8513
protocols.floppy_tail.FloppyTail: (6) 42  -67.1076  -67.3575
protocols.floppy_tail.FloppyTail: (2) 74  -67.2543  -68.8728
protocols.floppy_tail.FloppyTail: (7) 69  -68.4298  -69.5034
protocols.floppy_tail.FloppyTail: (5) 92  -63.0551  -66.1991
protocols.floppy_tail.FloppyTail: (6) 43  -67.1076  -67.3575
protocols.floppy_tail.FloppyTail: (2) 75  -67.3299  -68.8728
protocols.floppy_tail.FloppyTail: (1) 33  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (4) 36  -64.5396  -64.8513
protocols.floppy_tail.FloppyTail: (7) 70  -68.4259  -69.5034
protocols.floppy_tail.FloppyTail: (5) 93  -63.0551  -66.1991
protocols.floppy_tail.FloppyTail: (6) 44  -67.1076  -67.3575
protocols.floppy_tail.FloppyTail: (2) 76  -67.1087  -68.8728
protocols.floppy_tail.FloppyTail: (7) 71  -68.7743  -69.5034
protocols.floppy_tail.FloppyTail: (5) 94  -63.0569  -66.1991
protocols.floppy_tail.FloppyTail: (1) 34  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (4) 37  -64.5554  -64.8513
protocols.floppy_tail.FloppyTail: (6) 45  -67.1076  -67.3575
protocols.floppy_tail.FloppyTail: (2) 77  -66.4711  -68.8728
protocols.floppy_tail.FloppyTail: (7) 72  -68.7743  -69.5034
protocols.floppy_tail.FloppyTail: (5) 95  -63.0186  -66.1991
protocols.floppy_tail.FloppyTail: (1) 35  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (4) 38  -64.5554  -64.8513
protocols.floppy_tail.FloppyTail: (6) 46  -67.1076  -67.3575
protocols.floppy_tail.FloppyTail: (2) 78  -66.6831  -68.8728
protocols.floppy_tail.FloppyTail: (7) 73  -68.7743  -69.5034
protocols.floppy_tail.FloppyTail: (5) 96  -63.0186  -66.1991
protocols.floppy_tail.FloppyTail: (2) 79  -66.6831  -68.8728
protocols.floppy_tail.FloppyTail: (7) 74  -68.7719  -69.5034
protocols.floppy_tail.FloppyTail: (5) 97  -63.0186  -66.1991
protocols.floppy_tail.FloppyTail: (6) 47  -67.0855  -67.3575
protocols.floppy_tail.FloppyTail: (1) 36  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (4) 39  -63.6724  -64.8513
protocols.floppy_tail.FloppyTail: (5) 98  -63.152  -66.1991
protocols.floppy_tail.FloppyTail: (7) 75  -68.7719  -69.5034
protocols.floppy_tail.FloppyTail: (6) 48  -67.1572  -67.3575
protocols.floppy_tail.FloppyTail: (1) 37  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (5) 99  -63.152  -66.1991
protocols.floppy_tail.FloppyTail: (7) 76  -68.7719  -69.5034
protocols.floppy_tail.FloppyTail: (6) 49  -67.1572  -67.3575
protocols.floppy_tail.FloppyTail: (1) 38  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (7) 77  -68.8438  -69.5034
protocols.floppy_tail.FloppyTail: (6) 50  -66.8447  -67.3575
protocols.floppy_tail.FloppyTail: (7) 78  -68.7443  -69.5034
protocols.floppy_tail.FloppyTail: (6) 51  -65.9144  -67.3575
protocols.floppy_tail.FloppyTail: (1) 39  -64.7218  -65.272
protocols.floppy_tail.FloppyTail: (7) 79  -69.0035  -69.5034
protocols.floppy_tail.FloppyTail: (6) 52  -66.0625  -67.3575
protocols.floppy_tail.FloppyTail: (6) 53  -66.0625  -67.3575
protocols.floppy_tail.FloppyTail: (2) 80  -66.6833  -68.8728
protocols.floppy_tail.FloppyTail: (6) 54  -66.0625  -67.3575
protocols.floppy_tail.FloppyTail: (2) 81  -66.6833  -68.8728
protocols.floppy_tail.FloppyTail: (6) 55  -66.0625  -67.3575
protocols.floppy_tail.FloppyTail: (5) 100  -63.2783  -66.1991
protocols.floppy_tail.FloppyTail: (2) 82  -66.6833  -68.8728
protocols.floppy_tail.FloppyTail: (6) 56  -66.0625  -67.3575
protocols.floppy_tail.FloppyTail: (5) centroid score of final perturbed PDB: -66.1991
protocols.floppy_tail.FloppyTail: (2) 83  -66.6833  -68.8728
protocols.floppy_tail.FloppyTail: (6) 57  -66.3337  -67.3575
protocols.floppy_tail.FloppyTail: (5) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -8.327      -8.327
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.775     -14.775
 rama                         1.000     -11.188     -11.188
 env                          1.000     -33.357     -33.357
 cbeta                        1.000      35.699      35.699
---------------------------------------------------
 Total weighted score:                      -66.199
protocols.floppy_tail.FloppyTail: (5) One perturb took 0.451789 seconds
protocols.floppy_tail.FloppyTail: (5) perturb steps complete
protocols.floppy_tail.FloppyTail: (4) 40  -63.6746  -64.8513
protocols.floppy_tail.FloppyTail: (2) 84  -67.9912  -68.8728
protocols.floppy_tail.FloppyTail: (6) 58  -66.3337  -67.3575
protocols.floppy_tail.FloppyTail: (7) 80  -69.3224  -69.5034
protocols.floppy_tail.FloppyTail: (4) 41  -63.0737  -64.8513
protocols.floppy_tail.FloppyTail: (2) 85  -68.0227  -68.8728
protocols.floppy_tail.FloppyTail: (6) 59  -66.3337  -67.3575
protocols.floppy_tail.FloppyTail: (7) 81  -69.3224  -69.5034
protocols.floppy_tail.FloppyTail: (2) 86  -66.29  -68.8728
protocols.floppy_tail.FloppyTail: (4) 42  -63.0737  -64.8513
protocols.floppy_tail.FloppyTail: (7) 82  -69.3224  -69.5034
protocols.floppy_tail.FloppyTail: (2) 87  -65.7734  -68.8728
protocols.floppy_tail.FloppyTail: (4) 43  -63.1973  -64.8513
protocols.floppy_tail.FloppyTail: (7) 83  -69.3224  -69.5034
protocols.floppy_tail.FloppyTail: (2) 88  -65.7734  -68.8728
protocols.floppy_tail.FloppyTail: (3) centroid score of starting PDB: -62.5233
protocols.floppy_tail.FloppyTail: (7) 84  -69.3389  -69.5034
protocols.floppy_tail.FloppyTail: (3) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.000       0.000
 cenpack                      1.000      -7.056      -7.056
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.719     -14.719
 rama                         1.000     -11.493     -11.493
 env                          1.000     -30.766     -30.766
 cbeta                        1.000      35.761      35.761
---------------------------------------------------
 Total weighted score:                      -62.523
protocols.floppy_tail.FloppyTail: (4) 44  -62.8846  -64.8513
protocols.floppy_tail.FloppyTail: (2) 89  -65.7734  -68.8728
protocols.floppy_tail.FloppyTail: (7) 85  -69.3389  -69.5034
protocols.floppy_tail.FloppyTail: (2) 90  -65.7734  -68.8728
protocols.floppy_tail.FloppyTail: (3) shear on at 33
protocols.floppy_tail.FloppyTail: (3)    Current     Low    total cycles =100
protocols.floppy_tail.FloppyTail: (4) 45  -63.2192  -64.8513
protocols.floppy_tail.FloppyTail: (7) 86  -69.3389  -69.5034
protocols.floppy_tail.FloppyTail: (2) 91  -65.7734  -68.8728
protocols.floppy_tail.FloppyTail: (4) 46  -63.4151  -64.8513
protocols.floppy_tail.FloppyTail: (7) 87  -69.3389  -69.5034
protocols.floppy_tail.FloppyTail: (2) 92  -65.7734  -68.8728
protocols.floppy_tail.FloppyTail: (7) 88  -69.3389  -69.5034
protocols.floppy_tail.FloppyTail: (2) 93  -68.2238  -68.8728
protocols.floppy_tail.FloppyTail: (4) 47  -63.8571  -64.8513
protocols.floppy_tail.FloppyTail: (1) 40  -65.3812  -65.3812
protocols.floppy_tail.FloppyTail: (6) 60  -66.3487  -67.3575
protocols.floppy_tail.FloppyTail: (7) 89  -69.0245  -69.5034
protocols.floppy_tail.FloppyTail: (2) 94  -68.2238  -68.8728
protocols.floppy_tail.FloppyTail: (3) 1  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (4) 48  -63.9729  -64.8513
protocols.floppy_tail.FloppyTail: (6) 61  -66.5675  -67.3575
protocols.floppy_tail.FloppyTail: (7) 90  -69.0245  -69.5034
protocols.floppy_tail.FloppyTail: (1) 41  -65.3812  -65.3812
protocols.floppy_tail.FloppyTail: (2) 95  -69.4309  -69.4309
protocols.floppy_tail.FloppyTail: (3) 2  -62.5233  -62.5233
protocols.floppy_tail.FloppyTail: (6) 62  -66.5675  -67.3575
protocols.floppy_tail.FloppyTail: (4) 49  -63.9729  -64.8513
protocols.floppy_tail.FloppyTail: (7) 91  -69.0245  -69.5034
protocols.floppy_tail.FloppyTail: (2) 96  -69.4309  -69.4309
protocols.floppy_tail.FloppyTail: (1) 42  -65.3812  -65.3812
protocols.floppy_tail.FloppyTail: (6) 63  -66.6501  -67.3575
protocols.floppy_tail.FloppyTail: (7) 92  -69.0245  -69.5034
protocols.floppy_tail.FloppyTail: (3) 3  -62.4552  -62.5233
protocols.floppy_tail.FloppyTail: (4) 50  -63.9729  -64.8513
protocols.floppy_tail.FloppyTail: (2) 97  -69.4309  -69.4309
protocols.floppy_tail.FloppyTail: (6) 64  -66.2818  -67.3575
protocols.floppy_tail.FloppyTail: (7) 93  -69.0245  -69.5034
protocols.floppy_tail.FloppyTail: (1) 43  -65.3812  -65.3812
protocols.floppy_tail.FloppyTail: (3) 4  -62.5164  -62.5233
protocols.floppy_tail.FloppyTail: (4) 51  -64.8204  -64.8513
protocols.floppy_tail.FloppyTail: (2) 98  -69.4309  -69.4309
protocols.floppy_tail.FloppyTail: (6) 65  -66.0124  -67.3575
protocols.floppy_tail.FloppyTail: (7) 94  -68.7443  -69.5034
protocols.floppy_tail.FloppyTail: (1) 44  -65.3812  -65.3812
protocols.floppy_tail.FloppyTail: (2) 99  -68.6046  -69.4309
protocols.floppy_tail.FloppyTail: (3) 5  -62.5164  -62.5233
protocols.floppy_tail.FloppyTail: (6) 66  -65.6731  -67.3575
protocols.floppy_tail.FloppyTail: (4) 52  -64.8164  -64.8513
protocols.floppy_tail.FloppyTail: (7) 95  -68.3317  -69.5034
protocols.floppy_tail.FloppyTail: (6) 67  -65.4181  -67.3575
protocols.floppy_tail.FloppyTail: (1) 45  -65.3812  -65.3812
protocols.floppy_tail.FloppyTail: (3) 6  -62.5164  -62.5233
protocols.floppy_tail.FloppyTail: (7) 96  -66.566  -69.5034
protocols.floppy_tail.FloppyTail: (4) 53  -65.2107  -65.2107
protocols.floppy_tail.FloppyTail: (6) 68  -65.4181  -67.3575
protocols.floppy_tail.FloppyTail: (7) 97  -67.1384  -69.5034
protocols.floppy_tail.FloppyTail: (3) 7  -62.5164  -62.5233
protocols.floppy_tail.FloppyTail: (1) 46  -65.3043  -65.3812
protocols.floppy_tail.FloppyTail: (6) 69  -65.4181  -67.3575
protocols.floppy_tail.FloppyTail: (7) 98  -67.7404  -69.5034
protocols.floppy_tail.FloppyTail: (3) 8  -62.5164  -62.5233
protocols.floppy_tail.FloppyTail: (4) 54  -65.2107  -65.2107
protocols.floppy_tail.FloppyTail: (6) 70  -65.4181  -67.3575
protocols.floppy_tail.FloppyTail: (7) 99  -68.2686  -69.5034
protocols.floppy_tail.FloppyTail: (1) 47  -65.7868  -65.7868
protocols.floppy_tail.FloppyTail: (4) 55  -65.0186  -65.2107
protocols.floppy_tail.FloppyTail: (6) 71  -65.7582  -67.3575
protocols.floppy_tail.FloppyTail: (3) 9  -63.0141  -63.0141
protocols.floppy_tail.FloppyTail: (1) 48  -65.7868  -65.7868
protocols.floppy_tail.FloppyTail: (6) 72  -66.3067  -67.3575
protocols.floppy_tail.FloppyTail: (4) 56  -65.0186  -65.2107
protocols.floppy_tail.FloppyTail: (3) 10  -63.0141  -63.0141
protocols.floppy_tail.FloppyTail: (6) 73  -66.3067  -67.3575
protocols.floppy_tail.FloppyTail: (2) 100  -68.6049  -69.4309
protocols.floppy_tail.FloppyTail: (4) 57  -65.0186  -65.2107
protocols.floppy_tail.FloppyTail: (1) 49  -65.7902  -65.7902
protocols.floppy_tail.FloppyTail: (6) 74  -66.3067  -67.3575
protocols.floppy_tail.FloppyTail: (3) 11  -65.3612  -65.3612
protocols.floppy_tail.FloppyTail: (2) centroid score of final perturbed PDB: -69.4309
protocols.floppy_tail.FloppyTail: (4) 58  -64.3469  -65.2107
protocols.floppy_tail.FloppyTail: (2) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.073       0.073
protocols.floppy_tail.FloppyTail: (6) 75  -66.3067  -67.3575
 cenpack                      1.000      -9.952      -9.952
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.725     -14.725
 rama                         1.000     -13.352     -13.352
 env                          1.000     -32.581     -32.581
 cbeta                        1.000      35.356      35.356
---------------------------------------------------
 Total weighted score:                      -69.431
protocols.floppy_tail.FloppyTail: (2) One perturb took 0.472424 seconds
protocols.floppy_tail.FloppyTail: (2) perturb steps complete
protocols.floppy_tail.FloppyTail: (1) 50  -67.3252  -67.3252
protocols.floppy_tail.FloppyTail: (3) 12  -65.3612  -65.3612
protocols.floppy_tail.FloppyTail: (6) 76  -66.3067  -67.3575
protocols.floppy_tail.FloppyTail: (4) 59  -64.3469  -65.2107
protocols.floppy_tail.FloppyTail: (7) 100  -68.2747  -69.5034
protocols.floppy_tail.FloppyTail: (1) 51  -67.3252  -67.3252
protocols.floppy_tail.FloppyTail: (6) 77  -66.3067  -67.3575
protocols.floppy_tail.FloppyTail: (3) 13  -65.3612  -65.3612
protocols.floppy_tail.FloppyTail: (7) centroid score of final perturbed PDB: -69.5034
protocols.floppy_tail.FloppyTail: (6) 78  -66.3067  -67.3575
protocols.floppy_tail.FloppyTail: (1) 52  -66.9593  -67.3252
protocols.floppy_tail.FloppyTail: (7) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.029       0.029
 cenpack                      1.000      -8.817      -8.817
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.965     -14.965
 rama                         1.000     -13.409     -13.409
 env                          1.000     -33.689     -33.689
 cbeta                        1.000      35.598      35.598
protocols.floppy_tail.FloppyTail: (3) 14  -65.3612  -65.3612
---------------------------------------------------
 Total weighted score:                      -69.503
protocols.floppy_tail.FloppyTail: (7) One perturb took 0.477609 seconds
protocols.floppy_tail.FloppyTail: (7) perturb steps complete
protocols.floppy_tail.FloppyTail: (6) 79  -66.2597  -67.3575
protocols.floppy_tail.FloppyTail: (1) 53  -66.9593  -67.3252
protocols.floppy_tail.FloppyTail: (3) 15  -65.3612  -65.3612
protocols.floppy_tail.FloppyTail: (3) 16  -65.3612  -65.3612
protocols.floppy_tail.FloppyTail: (1) 54  -67.3353  -67.3353
protocols.floppy_tail.FloppyTail: (3) 17  -65.3612  -65.3612
protocols.floppy_tail.FloppyTail: (1) 55  -67.3353  -67.3353
protocols.floppy_tail.FloppyTail: (3) 18  -65.1137  -65.3612
protocols.floppy_tail.FloppyTail: (1) 56  -67.3353  -67.3353
protocols.floppy_tail.FloppyTail: (3) 19  -65.1137  -65.3612
protocols.floppy_tail.FloppyTail: (1) 57  -67.3353  -67.3353
protocols.floppy_tail.FloppyTail: (1) 58  -67.855  -67.855
protocols.floppy_tail.FloppyTail: (1) 59  -67.855  -67.855
protocols.floppy_tail.FloppyTail: (6) 80  -66.662  -67.3575
protocols.floppy_tail.FloppyTail: (4) 60  -64.6317  -65.2107
protocols.floppy_tail.FloppyTail: (6) 81  -66.662  -67.3575
protocols.floppy_tail.FloppyTail: (4) 61  -64.6317  -65.2107
protocols.floppy_tail.FloppyTail: (6) 82  -66.631  -67.3575
protocols.floppy_tail.FloppyTail: (4) 62  -64.6317  -65.2107
protocols.floppy_tail.FloppyTail: (6) 83  -66.631  -67.3575
protocols.floppy_tail.FloppyTail: (4) 63  -64.6317  -65.2107
protocols.floppy_tail.FloppyTail: (6) 84  -66.631  -67.3575
protocols.floppy_tail.FloppyTail: (4) 64  -64.6317  -65.2107
protocols.floppy_tail.FloppyTail: (6) 85  -66.6362  -67.3575
protocols.floppy_tail.FloppyTail: (3) 20  -65.1144  -65.3612
protocols.floppy_tail.FloppyTail: (4) 65  -64.766  -65.2107
protocols.floppy_tail.FloppyTail: (6) 86  -65.5145  -67.3575
protocols.floppy_tail.FloppyTail: (3) 21  -64.7939  -65.3612
protocols.floppy_tail.FloppyTail: (6) 87  -65.5145  -67.3575
protocols.floppy_tail.FloppyTail: (4) 66  -64.766  -65.2107
protocols.floppy_tail.FloppyTail: (6) 88  -65.2134  -67.3575
protocols.floppy_tail.FloppyTail: (3) 22  -65.5738  -65.5738
protocols.floppy_tail.FloppyTail: (4) 67  -64.9147  -65.2107
protocols.floppy_tail.FloppyTail: (1) 60  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (6) 89  -65.2134  -67.3575
protocols.floppy_tail.FloppyTail: (3) 23  -65.4975  -65.5738
protocols.floppy_tail.FloppyTail: (4) 68  -64.372  -65.2107
protocols.floppy_tail.FloppyTail: (1) 61  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (6) 90  -65.2134  -67.3575
protocols.floppy_tail.FloppyTail: (3) 24  -65.4975  -65.5738
protocols.floppy_tail.FloppyTail: (4) 69  -64.372  -65.2107
protocols.floppy_tail.FloppyTail: (1) 62  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (6) 91  -64.94  -67.3575
protocols.floppy_tail.FloppyTail: (3) 25  -65.5249  -65.5738
protocols.floppy_tail.FloppyTail: (6) 92  -64.94  -67.3575
protocols.floppy_tail.FloppyTail: (4) 70  -64.372  -65.2107
protocols.floppy_tail.FloppyTail: (1) 63  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (3) 26  -65.5249  -65.5738
protocols.floppy_tail.FloppyTail: (6) 93  -64.94  -67.3575
protocols.floppy_tail.FloppyTail: (4) 71  -64.2382  -65.2107
protocols.floppy_tail.FloppyTail: (1) 64  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (6) 94  -65.0224  -67.3575
protocols.floppy_tail.FloppyTail: (3) 27  -65.5249  -65.5738
protocols.floppy_tail.FloppyTail: (1) 65  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (4) 72  -64.9719  -65.2107
protocols.floppy_tail.FloppyTail: (6) 95  -65.1581  -67.3575
protocols.floppy_tail.FloppyTail: (3) 28  -65.2701  -65.5738
protocols.floppy_tail.FloppyTail: (1) 66  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (4) 73  -64.2462  -65.2107
protocols.floppy_tail.FloppyTail: (6) 96  -65.1581  -67.3575
protocols.floppy_tail.FloppyTail: (3) 29  -65.3654  -65.5738
protocols.floppy_tail.FloppyTail: (6) 97  -64.6171  -67.3575
protocols.floppy_tail.FloppyTail: (1) 67  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (4) 74  -64.255  -65.2107
protocols.floppy_tail.FloppyTail: (6) 98  -64.6171  -67.3575
protocols.floppy_tail.FloppyTail: (1) 68  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (3) 30  -65.3654  -65.5738
protocols.floppy_tail.FloppyTail: (4) 75  -64.2651  -65.2107
protocols.floppy_tail.FloppyTail: (6) 99  -64.6171  -67.3575
protocols.floppy_tail.FloppyTail: (1) 69  -67.8802  -67.8802
protocols.floppy_tail.FloppyTail: (3) 31  -65.5303  -65.5738
protocols.floppy_tail.FloppyTail: (4) 76  -64.2845  -65.2107
protocols.floppy_tail.FloppyTail: (1) 70  -66.5368  -67.8802
protocols.floppy_tail.FloppyTail: (3) 32  -65.5303  -65.5738
protocols.floppy_tail.FloppyTail: (4) 77  -64.7481  -65.2107
protocols.floppy_tail.FloppyTail: (3) 33  -65.5303  -65.5738
protocols.floppy_tail.FloppyTail: (1) 71  -66.4354  -67.8802
protocols.floppy_tail.FloppyTail: (4) 78  -64.0312  -65.2107
protocols.floppy_tail.FloppyTail: (1) 72  -66.4354  -67.8802
protocols.floppy_tail.FloppyTail: (3) 34  -65.5303  -65.5738
protocols.floppy_tail.FloppyTail: (4) 79  -64.1432  -65.2107
protocols.floppy_tail.FloppyTail: (1) 73  -66.4354  -67.8802
protocols.floppy_tail.FloppyTail: (3) 35  -65.4896  -65.5738
protocols.floppy_tail.FloppyTail: (3) 36  -63.8986  -65.5738
protocols.floppy_tail.FloppyTail: (1) 74  -66.0541  -67.8802
protocols.floppy_tail.FloppyTail: (6) 100  -64.6247  -67.3575
protocols.floppy_tail.FloppyTail: (3) 37  -63.8986  -65.5738
protocols.floppy_tail.FloppyTail: (1) 75  -66.0541  -67.8802
protocols.floppy_tail.FloppyTail: (6) centroid score of final perturbed PDB: -67.3575
protocols.floppy_tail.FloppyTail: (6) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.030       0.030
 cenpack                      1.000      -8.952      -8.952
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -15.167     -15.167
 rama                         1.000     -11.746     -11.746
 env                          1.000     -32.837     -32.837
 cbeta                        1.000      35.565      35.565
---------------------------------------------------
 Total weighted score:                      -67.358
protocols.floppy_tail.FloppyTail: (6) One perturb took 0.487848 seconds
protocols.floppy_tail.FloppyTail: (6) perturb steps complete
protocols.floppy_tail.FloppyTail: (3) 38  -63.8986  -65.5738
protocols.floppy_tail.FloppyTail: (1) 76  -66.0541  -67.8802
core.pack.task: (5) Packer task: initialize from command line() 
core.pack.task.ResfileReader: (5) On line 3, the pose does not have residue with chain=B, PDBnum=96.
protocols.floppy_tail.FloppyTail: (3) 39  -63.8986  -65.5738
protocols.floppy_tail.FloppyTail: (1) 77  -66.0541  -67.8802
protocols.floppy_tail.FloppyTail: (1) 78  -66.0541  -67.8802
protocols.floppy_tail.FloppyTail: (1) 79  -66.0263  -67.8802
protocols.floppy_tail.FloppyTail: (4) 80  -64.744  -65.2107
protocols.floppy_tail.FloppyTail: (4) 81  -64.6365  -65.2107
protocols.floppy_tail.FloppyTail: (4) 82  -64.5562  -65.2107
protocols.floppy_tail.FloppyTail: (4) 83  -64.6059  -65.2107
protocols.floppy_tail.FloppyTail: (3) 40  -63.9684  -65.5738
protocols.floppy_tail.FloppyTail: (3) 41  -65.3934  -65.5738
protocols.floppy_tail.FloppyTail: (3) 42  -65.4819  -65.5738
protocols.floppy_tail.FloppyTail: (3) 43  -65.328  -65.5738
protocols.floppy_tail.FloppyTail: (3) 44  -65.328  -65.5738
protocols.floppy_tail.FloppyTail: (1) 80  -66.6314  -67.8802
protocols.floppy_tail.FloppyTail: (4) 84  -64.8057  -65.2107
protocols.floppy_tail.FloppyTail: (3) 45  -65.941  -65.941
protocols.floppy_tail.FloppyTail: (4) 85  -64.9126  -65.2107
protocols.floppy_tail.FloppyTail: (3) 46  -65.941  -65.941
protocols.floppy_tail.FloppyTail: (4) 86  -64.7982  -65.2107
protocols.floppy_tail.FloppyTail: (4) 87  -64.9706  -65.2107
protocols.floppy_tail.FloppyTail: (3) 47  -66.0911  -66.0911
core.pack.task: (2) Packer task: initialize from command line() 
core.pack.task.ResfileReader: (2) On line 3, the pose does not have residue with chain=B, PDBnum=96.
protocols.floppy_tail.FloppyTail: (4) 88  -64.478  -65.2107
protocols.floppy_tail.FloppyTail: (3) 48  -66.7186  -66.7186
protocols.floppy_tail.FloppyTail: (4) 89  -64.2575  -65.2107
protocols.floppy_tail.FloppyTail: (1) 81  -66.3689  -67.8802
protocols.floppy_tail.FloppyTail: (3) 49  -66.7186  -66.7186
protocols.floppy_tail.FloppyTail: (4) 90  -64.255  -65.2107
core.pack.task: (7) Packer task: initialize from command line() 
protocols.floppy_tail.FloppyTail: (3) 50  -66.7186  -66.7186
protocols.floppy_tail.FloppyTail: (4) 91  -64.321  -65.2107
core.pack.task.ResfileReader: (7) On line 3, the pose does not have residue with chain=B, PDBnum=96.
protocols.floppy_tail.FloppyTail: (4) 92  -65.0618  -65.2107
protocols.floppy_tail.FloppyTail: (3) 51  -66.4791  -66.7186
protocols.floppy_tail.FloppyTail: (4) 93  -64.9018  -65.2107
protocols.floppy_tail.FloppyTail: (3) 52  -66.0854  -66.7186
protocols.floppy_tail.FloppyTail: (1) 82  -66.3689  -67.8802
protocols.floppy_tail.FloppyTail: (1) 83  -66.3689  -67.8802
protocols.floppy_tail.FloppyTail: (3) 53  -65.848  -66.7186
protocols.floppy_tail.FloppyTail: (1) 84  -66.3689  -67.8802
protocols.floppy_tail.FloppyTail: (3) 54  -65.848  -66.7186
protocols.floppy_tail.FloppyTail: (1) 85  -66.3689  -67.8802
protocols.floppy_tail.FloppyTail: (3) 55  -65.848  -66.7186
protocols.floppy_tail.FloppyTail: (3) 56  -65.848  -66.7186
protocols.floppy_tail.FloppyTail: (1) 86  -66.3689  -67.8802
protocols.floppy_tail.FloppyTail: (1) 87  -66.1583  -67.8802
protocols.floppy_tail.FloppyTail: (3) 57  -65.848  -66.7186
protocols.floppy_tail.FloppyTail: (3) 58  -66.0704  -66.7186
protocols.floppy_tail.FloppyTail: (1) 88  -66.1583  -67.8802
protocols.floppy_tail.FloppyTail: (1) 89  -66.1583  -67.8802
protocols.floppy_tail.FloppyTail: (3) 59  -66.0704  -66.7186
protocols.floppy_tail.FloppyTail: (1) 90  -66.1583  -67.8802
protocols.floppy_tail.FloppyTail: (1) 91  -66.1583  -67.8802
protocols.floppy_tail.FloppyTail: (1) 92  -68.5266  -68.5266
protocols.floppy_tail.FloppyTail: (1) 93  -68.5266  -68.5266
protocols.floppy_tail.FloppyTail: (4) 94  -64.9018  -65.2107
protocols.floppy_tail.FloppyTail: (4) 95  -64.7656  -65.2107
protocols.floppy_tail.FloppyTail: (1) 94  -68.3828  -68.5266
protocols.floppy_tail.FloppyTail: (4) 96  -63.4336  -65.2107
protocols.floppy_tail.FloppyTail: (1) 95  -68.3828  -68.5266
protocols.floppy_tail.FloppyTail: (4) 97  -63.4336  -65.2107
protocols.floppy_tail.FloppyTail: (1) 96  -68.3828  -68.5266
protocols.floppy_tail.FloppyTail: (4) 98  -63.4336  -65.2107
protocols.floppy_tail.FloppyTail: (3) 60  -66.1042  -66.7186
protocols.floppy_tail.FloppyTail: (1) 97  -68.702  -68.702
protocols.floppy_tail.FloppyTail: (3) 61  -66.1042  -66.7186
protocols.floppy_tail.FloppyTail: (1) 98  -68.3197  -68.702
protocols.floppy_tail.FloppyTail: (1) 99  -68.3197  -68.702
protocols.floppy_tail.FloppyTail: (3) 62  -66.1042  -66.7186
protocols.floppy_tail.FloppyTail: (3) 63  -66.1042  -66.7186
protocols.floppy_tail.FloppyTail: (4) 99  -63.329  -65.2107
protocols.floppy_tail.FloppyTail: (3) 64  -66.1042  -66.7186
protocols.floppy_tail.FloppyTail: (3) 65  -63.7711  -66.7186
protocols.floppy_tail.FloppyTail: (3) 66  -63.7711  -66.7186
core.pack.task: (6) Packer task: initialize from command line() 
core.pack.task.ResfileReader: (6) On line 3, the pose does not have residue with chain=B, PDBnum=96.
protocols.floppy_tail.FloppyTail: (3) 67  -63.6149  -66.7186
protocols.floppy_tail.FloppyTail: (1) 100  -68.3287  -68.702
protocols.floppy_tail.FloppyTail: (3) 68  -64.1884  -66.7186
protocols.floppy_tail.FloppyTail: (1) centroid score of final perturbed PDB: -68.702
protocols.floppy_tail.FloppyTail: (1) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.041       0.041
 cenpack                      1.000     -10.130     -10.130
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -15.189     -15.189
 rama                         1.000     -11.374     -11.374
 env                          1.000     -33.452     -33.452
 cbeta                        1.000      35.652      35.652
---------------------------------------------------
 Total weighted score:                      -68.702
protocols.floppy_tail.FloppyTail: (1) One perturb took 0.629637 seconds
protocols.floppy_tail.FloppyTail: (1) perturb steps complete
protocols.floppy_tail.FloppyTail: (3) 69  -63.7736  -66.7186
protocols.floppy_tail.FloppyTail: (3) 70  -63.7143  -66.7186
protocols.floppy_tail.FloppyTail: (3) 71  -63.4275  -66.7186
protocols.floppy_tail.FloppyTail: (4) 100  -64.6941  -65.2107
protocols.floppy_tail.FloppyTail: (4) centroid score of final perturbed PDB: -65.2107
protocols.floppy_tail.FloppyTail: (4) ------------------------------------------------------------
 Scores                       Weight   Raw Score Wghtd.Score
------------------------------------------------------------
 vdw                          1.000       0.027       0.027
 cenpack                      1.000      -8.458      -8.458
 hbond_sr_bb                  1.000     -25.730     -25.730
 hbond_lr_bb                  1.000      -8.520      -8.520
 pair                         1.000     -14.359     -14.359
 rama                         1.000     -13.358     -13.358
 env                          1.000     -30.764     -30.764
 cbeta                        1.000      35.950      35.950
---------------------------------------------------
 Total weighted score:                      -65.211
protocols.floppy_tail.FloppyTail: (4) One perturb took 0.617122 seconds
protocols.floppy_tail.FloppyTail: (4) perturb steps complete
protocols.floppy_tail.FloppyTail: (3) 72  -63.4275  -66.7186
protocols.floppy_tail.FloppyTail: (3) 73  -63.4275  -66.7186
protocols.floppy_tail.FloppyTail: (3) 74  -63.4275  -66.7186
protocols.floppy_tail.FloppyTail: (3) 75  -63.5189  -66.7186
protocols.floppy_tail.FloppyTail: (3) 76  -63.5189  -66.7186
protocols.floppy_tail.FloppyTail: (3) 77  -63.1057  -66.7186
protocols.floppy_tail.FloppyTail: (3) 78  -63.1057  -66.7186
protocols.floppy_tail.FloppyTail: (3) 79  -63.2479  -66.7186
protocols.floppy_tail.FloppyTail: (3) 80  -64.83  -66.7186
protocols.floppy_tail.FloppyTail: (3) 81  -65.4156  -66.7186
protocols.floppy_tail.FloppyTail: (3) 82  -65.4156  -66.7186