#rosetta residue topology file NAME PCA IO_STRING PCA X TYPE POLYMER #residue type AA UNK ATOM N Npro N -0.3730668 -0.100 ATOM CA CAbb CP1 0.0257287 0.100 ATOM C CObb C 0.6884871 0.550 ATOM O OCbb O -0.6884871 -0.550 ATOM CB CH2 CP2 -0.2315587 0.000 ATOM CG CH2 CP2 -0.2315587 0.000 ATOM CD CH2 CP3 0.0000000 0.000 ATOM OE ONH2 O -0.53 -0.55 ATOM NV VIRT VIRT 0.0000000 0.000 ATOM 1HG Hapo HA 0.1157793 0.000 ATOM 2HG Hapo HA 0.1157793 0.000 ATOM 1HB Hapo HA 0.1157793 0.000 ATOM 2HB Hapo HA 0.1157793 0.000 ATOM HA Hapo HB 0.1157793 0.000 LOWER_CONNECT N UPPER_CONNECT C BOND N CA BOND N CD BOND CA C BOND CA CB BOND CA HA BOND_TYPE C O 2 BOND CB CG BOND CB 1HB BOND CB 2HB BOND CG CD BOND CG 1HG BOND CG 2HG BOND CD NV BOND_TYPE CD OE 2 CUT_BOND CD N CHI 1 N CA CB CG CHI 2 CA CB CG CD CHI 3 CB CG CD NV PROPERTIES PROTEIN ALPHA_AA L_AA POLAR NBR_ATOM CB # APL Declare that the NV atom should shadow the N atom to the cart-bonded term. VIRTUAL_SHADOW NV N # APL O to CB distance; max observed in ubiquitin NBR_RADIUS 3.4473 FIRST_SIDECHAIN_ATOM CB ACT_COORD_ATOMS CB CG CD END ICOOR_INTERNAL N 0.000000 0.000000 0.000000 N CA C ICOOR_INTERNAL CA 0.000000 180.000000 1.458002 N CA C ICOOR_INTERNAL C 0.000000 68.799965 1.523259 CA N C ICOOR_INTERNAL UPPER 150.000000 63.799976 1.328686 C CA N ICOOR_INTERNAL O 179.999985 59.199947 1.231015 C CA UPPER ICOOR_INTERNAL CB -119.700000 77.000000 1.532000 CA N C ICOOR_INTERNAL CG 30.000000 75.800000 1.490600 CB CA N ICOOR_INTERNAL CD -33.900000 75.600000 1.505500 CG CB CA ICOOR_INTERNAL OE -162.108931 52.448404 1.212239 CD CG CB ICOOR_INTERNAL NV 0.000000 77.300000 1.475400 CD CG N ICOOR_INTERNAL 1HG 121.200000 69.800000 1.100000 CG CB CD ICOOR_INTERNAL 2HG 117.600000 69.800000 1.100000 CG CB 1HG ICOOR_INTERNAL 1HB 121.200000 70.000000 1.100000 CB CA CG ICOOR_INTERNAL 2HB 117.600000 70.000000 1.100000 CB CA 1HB ICOOR_INTERNAL HA -118.000000 70.800000 1.100000 CA N CB ICOOR_INTERNAL LOWER -150.000000 58.299934 1.328686 N CA C