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Wang KH, Isidro AL, Domingues L, Eskandarian HA, McKenney PT, Drew K, Grabowski P, Chua MH, Barry SN, Guan M, Bonneau R, Henriques AO, Eichenberger P (2009)
The coat morphogenetic protein SpoVID is necessary for spore encasement in Bacillus subtilis.
Mol Microbiol 74:634-49 -
Kidd BA, Baker D, Thomas WE (2009)
Computation of conformational coupling in allosteric proteins.
PLoS Comput Biol 5:e1000484 -
Mandell DJ, Kortemme T (2009)
Backbone flexibility in computational protein design.
Curr Opin Biotechnol 20:420-8 -
Raman S, Vernon R, Thompson J, Tyka M, Sadreyev R, Pei J, Kim D, Kellogg E, DiMaio F, Lange O, Kinch L, Sheffler W, Kim BH, Das R, Grishin NV, Baker D (2009)
Structure prediction for CASP8 with all-atom refinement using Rosetta.
Proteins 77 Suppl 9:89-99 -
Wu YI, Frey D, Lungu OI, Jaehrig A, Schlichting I, Kuhlman B, Hahn KM (2009)
A genetically encoded photoactivatable Rac controls the motility of living cells.
Nature 461:104-8 -
Karanicolas J, Kuhlman B (2009)
Computational design of affinity and specificity at protein-protein interfaces.
Curr Opin Struct Biol 19:458-63 -
Kim DE, Blum B, Bradley P, Baker D (2009)
Sampling bottlenecks in de novo protein structure prediction.
J Mol Biol 393:249-60 -
Mandell DJ, Coutsias EA, Kortemme T (2009)
Sub-angstrom accuracy in protein loop reconstruction by robotics-inspired conformational sampling.
Nat Methods 6:551-2 -
Lindert S, Staritzbichler R, Wötzel N, Karakaş M, Stewart PL, Meiler J (2009)
EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps.
Structure 17:990-1003 -
DiMaio F, Tyka MD, Baker ML, Chiu W, Baker D (2009)
Refinement of protein structures into low-resolution density maps using rosetta.
J Mol Biol 392:181-90