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Chien YC, Masica DL, Gray JJ, Nguyen S, Vali H, McKee MD (2009)
Modulation of calcium oxalate dihydrate growth by selective crystal-face binding of phosphorylated osteopontin and polyaspartate peptide showing occlusion by sectoral (compositional) zoning.
J Biol Chem 284:23491-501 -
Davis IW, Raha K, Head MS, Baker D (2009)
Blind docking of pharmaceutically relevant compounds using RosettaLigand.
Protein Sci 18:1998-2002 -
Friedland GD, Lakomek NA, Griesinger C, Meiler J, Kortemme T (2009)
A correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family.
PLoS Comput Biol 5:e1000393 -
Havranek JJ, Baker D (2009)
Motif-directed flexible backbone design of functional interactions.
Protein Sci 18:1293-305 -
Murphy PM, Bolduc JM, Gallaher JL, Stoddard BL, Baker D (2009)
Alteration of enzyme specificity by computational loop remodeling and design.
Proc Natl Acad Sci U S A 106:9215-20 -
Sircar A, Kim ET, Gray JJ (2009)
RosettaAntibody: antibody variable region homology modeling server.
Nucleic Acids Res 37:W474-9 -
Lees-Miller JP, Subbotina JO, Guo J, Yarov-Yarovoy V, Noskov SY, Duff HJ (2009)
Interactions of H562 in the S5 helix with T618 and S621 in the pore helix are important determinants of hERG1 potassium channel structure and function.
Biophys J 96:3600-10 -
Stepanovic SZ, Potet F, Petersen CI, Smith JA, Meiler J, Balser JR, Kupershmidt S (2009)
The evolutionarily conserved residue A653 plays a key role in HERG channel closing.
J Physiol 587:2555-66 -
Ashworth J, Baker D (2009)
Assessment of the optimization of affinity and specificity at protein-DNA interfaces.
Nucleic Acids Res 37:e73 -
Masica DL, Gray JJ (2009)
Solution- and adsorbed-state structural ensembles predicted for the statherin-hydroxyapatite system.
Biophys J 96:3082-91