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getting Rosetta to work with Phenix

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getting Rosetta to work with Phenix

I am trying to get Rosetta to work with Phenix phenix-1.7.3-928. But first I need to
get rosetta compiled. It does not compile without an error.I start with:

[rosetta@paprika ~/Desktop]$ python -V
Python 2.6.6

python bin mode=release

and it runs for a while and then:

g++ -o build/src/release/linux/2.6/64/x86/gcc/protocols/nonlocal/NonlocalAbinitioReader.os -c -isystem external/boost_1_46_1/boost/ -isystem external/boost_1_46_1/boost/ -O3 -ffast-math -funroll-loops -finline-functions -finline-limit=20000 -s -Wno-unused-variable -fPIC -DNDEBUG -Isrc -Iexternal/include -Isrc/platform/linux/64/gcc -Isrc/platform/linux/64 -Isrc/platform/linux -Iexternal/boost_1_46_1 -Iexternal/dbio -I/usr/local/include -I/usr/include src/protocols/nonlocal/
src/protocols/nonlocal/ In static member function 'static void protocols::nonlocal::NonlocalAbinitioReader::read(const std::string&, utility::vector1 >*)':
src/protocols/nonlocal/ internal compiler error: Segmentation fault
Please submit a full bug report,
with preprocessed source if appropriate.
See for instructions.
Preprocessed source stored into /tmp/ccUmFWht.out file, please attach this to your bugreport.
scons: *** [build/src/release/linux/2.6/64/x86/gcc/protocols/nonlocal/NonlocalAbinitioReader.os] Error 1
scons: building terminated because of errors.

Does this look like a gcc problem, a python problem, or a Rosetta problem.

My system is a RHEL6.2 X86_64 system.

Linux paprika 2.6.32-220.4.2.el6.x86_64 #1 SMP Mon Feb 6 16:39:28 EST 2012 x86_64 x86_64 x86_64 GNU/Linux

[rosetta@paprika rosetta_source]$ gcc -v
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl= --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj- --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.4.6 20110731 (Red Hat 4.4.6-3) (GCC)

Do I have the wrong OS?


Post Situation: 
Sun, 2012-03-04 12:54