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Rosetta 3 - Build/Install

Error with DisjointSets while compiling Rosetta 3.8 using scons

Category: 
Compilation

We have been working with rosetta 2016.32 for a while, which compiles just fine. recently we decided to upgrade to the 3.8 release (2017.08). compiling with 'scons mode=release' reuslts in the following error trace:

Post Situation: 

Features Reporters missing documentation in rosetta_scripts -info

Category: 
Docking

Running the command 

rosetta_scripts.macosclangrelease -info InterfaceFeature

with randomly selected Features Reporters always returns an error. The info flag behaves correctly for other Rosetta Scripts tags for example passing MutateResidue. 

Rosetta 3.8 on Mac OSX.

core.init: Rosetta version unknown:exported  from http://www.rosettacommons.org

core.init: command: rosetta_scripts.macosclangrelease -info InterfaceFeature

Post Situation: 

cxx11 error with antibody modelling

Category: 
Structure prediction
Design

Dear all,

I built the last release 2017.08 recently. I have not encountered any error during the build. Here is the command I ran:

./scons.py -j8 mode=release bin extras=cxx11 extras=mpi

I have gcc version 5.4.0 so according to build tutorial this should new enough to have C++11 support. 

But when I am running antibody.linuxrelease as according to the protocol on

Post Situation: 

Rosetta CM executables not built

Category: 
Structure prediction

Hi,

I downloaded the 2016 linux release of Rosetta3 (rosetta_bin_linux_2016.32.58837_bundle) about 6 months ago. I have just now found that the partial_thread.default.linuxgccrelease executable needed for RosettaCM is missing. Is there any particular reason why it would not have been built? How do I fix it?

Thank you,

Claire 

Post Situation: 

Rosetta_2016.32.58837-openmpi-1.10.2-gcc-6.1.0 compile errors

Category: 
Compilation

Hi, 

Im trying to cmpile Rosetta 3.7 with openmpi and getting the following errors. Please help.

Environmet: Centos 7.3 

Modules loaded : GCC/6.1.0, openmpi/1.10.2

mpicc --version
gcc (GCC) 6.1.0
######################################################################################################

Post Situation: 

gcc error during MPI compilation, unrecognized option '-plugin'

Category: 
Compilation

Hello,

 

I am trying to complie the week46 built (rosetta_bin_linux_2016.46.59086_bundle) on a machine with 1) python/2.7.11    2) gcc/4.9.2        3) openmpi/1.10.1

I get the following error:

Post Situation: 

PocketGrid.cc file error during Rosetta compiling

Category: 
Compilation

Hi,

I am trying to compile Rosetta 3.7 (Released Sep 11, 2016) and it was building fine until it hit this error (attached below). It seems to be upset about the PocketGrid.cc file, but I'm not sure how to go about solving the error since I'm not familiar with coding languages. Any help would be greatly appreciated. Thank you.

Marlyn

 

Post Situation: 

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