Is there a tutorial that can show how to preform fragment picking in PyRosetta? I want to generate fragments for many structures and I do not want to overwhelm the Robetta server, thus I want to preform it in-house.
Any help on how or where to start to generate fragments using PyRosetta? I found that there is a mover FragmentPicker() in pyrosetta.rosetta.protocols.frag_picker but I do not know how to use it.
This is my code so far:
mover = pyrosetta.rosetta.protocols.frag_picker.FragmentPicker() mover.read_vall('vall.jul19.2011.gz') mover.bounded_protocol()