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Bound Ligand Protein-Protein Docking

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Bound Ligand Protein-Protein Docking


I am trying to run on the Rosie server some docking2 tests with bound ligand in each protein. In fact, I would like to explore a situation of how two protein interacts with each other with bound ligand. However, when I launch jobs with ligand coordinates at its final site included in the PDB, the simulation fails and I receive an error message.

I, therefore, write to ask whether is it possible to do on ROSIE server?

I thank you all in advance,


Post Situation: 
Mon, 2019-04-08 12:18