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Argument Error while running

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Argument Error while running


I am facing trouble running the script ligand I have prepared the pdb file and params file as instructed. I have also added the params file to the default directory and updated residue_types.txt file. The following error gets invoked. Please do help rectify the error.

Traceback (most recent call last):
  File "", line 139, in <module>
    sample_ligand_interface(pdb_filename, partners, ligand_params, jobs, job_output)
  File "", line 30, in sample_ligand_interface
    new_res_set = generate_nonstandard_residue_set(ligand_params)
  File "", line 102, in generate_nonstandard_residue_set
    res_set.read_files( params_list , atoms , mm_atoms , orbitals )
AttributeError: 'ResidueTypeSet' object has no attribute 'read_files'


I have attached the script below.

Ligand_Interface_script.txt4.57 KB
Post Situation: 
Sat, 2021-03-13 21:54