Hello everyone,
By chance, I tried several times relax module for one same protein structure.
I got all different relaxed energy socres.
Which score is representive for this protein structure?
And of two similar structures mutated by 1 or 2 different positions, which structure can have the better structure?
By what criteria did you think that?
Category:
Post Situation:
If you are doing FastRelax this is normal, because it is a stochastic process. I would take the structure with the lowest energy.
Thank you for the response.
Do you know any other option to decrease the score differences for one same protein ?
What do you think of "-constant_seed" option ?